RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SLC30A7Q8NEW0 376 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 OR10AD1Q8NGE0 317 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 ARRDC2Q8TBH0 407 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 DAZLQ92904 295 aaKnown RBP5.6□□□□□ -1.51
TDP1-215ENST00000556498 UCN3Q969E3 161 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 RERGQ96A58 199 aaPredicted RBP5.6□□□□□ -1.51
TDP1-215ENST00000556498 SLCO4A1Q96BD0 722 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 TRMT61AQ96FX7 289 aaKnown RBP5.6□□□□□ -1.51
TDP1-215ENST00000556498 PYURFQ96I23 114 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 JSRP1Q96MG2 331 aaPredicted RBP5.6□□□□□ -1.51
TDP1-215ENST00000556498 GUCD1Q96NT3 240 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 MS4A4EQ96PG1 132 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 F2RL3Q96RI0 385 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 SYT3Q9BQG1 590 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 C20orf24Q9BUV8 137 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 ULBP2Q9BZM5 246 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 OR2J1Q9GZK6 312 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 OR8D2Q9GZM6 311 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 TXNIPQ9H3M7 391 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 MS4A5Q9H3V2 200 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 UBQLN4Q9NRR5 601 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 SPANXCQ9NY87 97 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 ELOVL5Q9NYP7 299 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 IL17CQ9P0M4 197 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 JPT1Q9UK76 154 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 ZNF346Q9UL40 294 aaKnown RBP5.6□□□□□ -1.51
TDP1-215ENST00000556498 KCNK6Q9Y257 313 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 CHST2Q9Y4C5 530 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 MYH15Q9Y2K3 1946 aa5.6□□□□□ -1.51
TDP1-215ENST00000556498 KIF1AQ12756 1690 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 QRICH2Q9H0J4 1663 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 LOC105371242A0A075B767 164 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 FAM237BA0A1B0GVD1 139 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 ZNF726A6NNF4 738 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 GPR31O00270 319 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 PEX12O00623 359 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 CYB561D2O14569 222 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 OR7A17O14581 309 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 RFXANKO14593 260 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 B4GALT5O43286 388 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 ACTL6BO94805 426 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 RGS11O94810 467 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 S1PR2O95136 353 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 RAB36O95755 333 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 MPIG6BO95866 241 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 SLC16A8O95907 504 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 TFP02787 698 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 CRYGBP07316 175 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 UMODP07911 640 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 TMEM253P0C7T8 217 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 OR13C7P0DN81 318 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 CD37P11049 281 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 KITLGP21583 273 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 NFYAP23511 347 aaPredicted RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 PSMA1P25786 263 aaKnown RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 KLRC1P26715 233 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 SLC6A6P31641 620 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 CCKARP32238 428 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 RPL21P46778 160 aaKnown RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 ART1P52961 327 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 RPL32P62910 135 aaKnown RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 SELENOWP63302 87 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 MRPS34P82930 218 aaKnown RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 RHOGP84095 191 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 SRSF1Q07955 248 aaKnown RBP eCLIP5.59□□□□□ -1.51
TDP1-215ENST00000556498 PPP1R8Q12972 351 aaKnown RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 GAGE5Q13069 117 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 GAGE6Q13070 117 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 HTR4Q13639 388 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 TPBGQ13641 420 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 ZNF235Q14590 738 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 EBPQ15125 230 aaKnown RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 ARHGAP11BQ3KRB8 267 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 ZNF585BQ52M93 769 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 TFDP3Q5H9I0 405 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 FAM78BQ5VT40 261 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 DCAF12L1Q5VU92 463 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 CES5AQ6NT32 575 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 RNASEKQ6P5S7 137 aaKnown RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 SHC4Q6S5L8 630 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 MOB3CQ70IA8 216 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 OLIG3Q7RTU3 272 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 H2BFWTQ7Z2G1 175 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 GOLGA7Q7Z5G4 137 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 PIGZQ86VD9 579 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 CMTM8Q8IZV2 173 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 FTMTQ8N4E7 242 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 BPIFB2Q8N4F0 458 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 CBR4Q8N4T8 237 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 C2orf73Q8N5S3 287 aaPredicted RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 LINC00482Q8N8I6 264 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 OR4S1Q8NGB4 309 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 OR1L6Q8NGR2 347 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 OR52E5Q8NH55 327 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 TFB1MQ8WVM0 346 aaKnown RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 POP5Q969H6 163 aaKnown RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 MCHR2Q969V1 340 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 MEIS3Q99687 375 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 C20orf144Q9BQM9 153 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 MIEN1Q9BRT3 115 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms