RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 Q9UFV3 132 aa9.72□□□□□ -0.85
TMEM260-208ENST00000555905 KCNG2Q9UJ96 466 aa9.72□□□□□ -0.85
TMEM260-208ENST00000555905 POLR1DQ9Y2S0 133 aa9.72□□□□□ -0.85
TMEM260-208ENST00000555905 UGT2A1Q9Y4X1 527 aa9.72□□□□□ -0.85
TMEM260-208ENST00000555905 SNX5Q9Y5X3 404 aa9.72□□□□□ -0.85
TMEM260-208ENST00000555905 COMMD3-BMI1R4GMX3 469 aa9.72□□□□□ -0.85
TMEM260-208ENST00000555905 COL6A6A6NMZ7 2263 aa9.72□□□□□ -0.85
TMEM260-208ENST00000555905 RP1L1Q8IWN7 2480 aaPredicted RBP9.72□□□□□ -0.85
TMEM260-208ENST00000555905 KALRNO60229 2985 aa9.71□□□□□ -0.85
TMEM260-208ENST00000555905 A0A087WXM4 84 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 A0A1B0GUH1 482 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 DAPL1A0PJW8 107 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 TRIM64A6NGJ6 449 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 DVL2O14641 736 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 MPZL1O95297 269 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 FARS2O95363 451 aaKnown RBP9.71□□□□□ -0.86
TMEM260-208ENST00000555905 CGAP01215 116 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 TFP02787 698 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 SPARCP09486 303 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 OR2T7P0C7T2 308 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 GAAP10253 952 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 MSR1P21757 451 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 BMP5P22003 454 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 MPGP29372 298 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 ENTPD1P49961 510 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 MRPS34P82930 218 aaKnown RBP9.71□□□□□ -0.86
TMEM260-208ENST00000555905 TGFBR3Q03167 851 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 KCNMB1Q16558 191 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 MEP1BQ16820 701 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 NRN1LQ496H8 165 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 ZNF773Q6PK81 442 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 LYPD4Q6UWN0 246 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 BEND4Q6ZU67 534 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 FOXL2NBQ6ZUU3 175 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 SHFQ7M4L6 423 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 PRSS48Q7RTY5 328 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 SLC35F2Q8IXU6 374 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 TIGD4Q8IY51 512 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 ACBD7Q8N6N7 88 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 OR2T27Q8NH04 317 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 C11orf40Q8WZ69 217 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 ZNF837Q96EG3 531 aaPredicted RBP9.71□□□□□ -0.86
TMEM260-208ENST00000555905 MRPL48Q96GC5 212 aaKnown RBP9.71□□□□□ -0.86
TMEM260-208ENST00000555905 MYCBPQ99417 103 aaPredicted RBP9.71□□□□□ -0.86
TMEM260-208ENST00000555905 MNTQ99583 582 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 FOXB1Q99853 325 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 YIPF3Q9GZM5 350 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 OPN3Q9H1Y3 402 aaPredicted RBP9.71□□□□□ -0.86
TMEM260-208ENST00000555905 KCNN2Q9H2S1 579 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 WDR76Q9H967 626 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 SIAEQ9HAT2 523 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 POLE4Q9NR33 117 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 INPP5EQ9NRR6 644 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 TMEM38BQ9NVV0 291 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 MRPL22Q9NWU5 206 aaKnown RBP9.71□□□□□ -0.86
TMEM260-208ENST00000555905 DIMT1Q9UNQ2 313 aaKnown RBP9.71□□□□□ -0.86
TMEM260-208ENST00000555905 EXOSC1Q9Y3B2 195 aaKnown RBP9.71□□□□□ -0.86
TMEM260-208ENST00000555905 TMEM14AQ9Y6G1 99 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 FREM1Q5H8C1 2179 aa9.71□□□□□ -0.86
TMEM260-208ENST00000555905 INTS1Q8N201 2190 aaKnown RBP9.71□□□□□ -0.86
TMEM260-208ENST00000555905 EEF1E1-BLOC1S5C9J1V9 151 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 ZNF670-ZNF695F2Z2N8 137 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 J3QRE1 110 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 MSTNO14793 375 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 PHYHO14832 338 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 EEF1E1O43324 174 aaKnown RBP9.7□□□□□ -0.86
TMEM260-208ENST00000555905 IGHA1P01876 353 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 PRB1P04280 392 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 OR8G3PP0DMU2 310 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 C21orf33P30042 268 aaPredicted RBP9.7□□□□□ -0.86
TMEM260-208ENST00000555905 CDH15P55291 814 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 LSM6P62312 80 aaKnown RBP9.7□□□□□ -0.86
TMEM260-208ENST00000555905 ARF1P84077 181 aaKnown RBP9.7□□□□□ -0.86
TMEM260-208ENST00000555905 PIGFQ07326 219 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 P2RY6Q15077 328 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 TEX30Q5JUR7 227 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 FAM27BQ5VT28 67 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 C9orf135Q5VTT2 229 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 SLC18B1Q6NT16 456 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 MTFR2Q6P444 385 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 ZNF813Q6ZN06 617 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 FJX1Q86VR8 437 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 CDC20BQ86Y33 519 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 ZNF843Q8N446 348 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 SLC22A24Q8N4F4 322 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 SVOPQ8N4V2 548 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 ZNF610Q8N9Z0 462 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 OR2AJ1Q8NGZ0 328 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 PRR7Q8TB68 274 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 SGCDQ92629 289 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 NABP1Q96AH0 204 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 TBX5Q99593 518 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 JAM3Q9BX67 310 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 CDCA4Q9BXL8 241 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 VCX3AQ9NNX9 186 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 EMC7Q9NPA0 242 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 TAS2R16Q9NYV7 291 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 LAMP5Q9UJQ1 280 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 ERGIC3Q9Y282 383 aa9.7□□□□□ -0.86
TMEM260-208ENST00000555905 A0A1W2PQL4 384 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms