RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ZNF248Q8NDW4 579 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 RNF128Q8TEB7 428 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 TSLPQ969D9 159 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 ADIPOR1Q96A54 375 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 PNPLA2Q96AD5 504 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 SEMA4CQ9C0C4 833 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 TXNIPQ9H3M7 391 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 CDCP1Q9H5V8 836 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 NARFLQ9H6Q4 476 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 ING1Q9UK53 422 aaPredicted RBP6.31□□□□□ -1.4
TDP1-213ENST00000555880 B9D1Q9UPM9 204 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 SPEF1Q9Y4P9 236 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 RANBP2P49792 3224 aaKnown RBP6.31□□□□□ -1.4
TDP1-213ENST00000555880 BRWD1Q9NSI6 2320 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 UNC80Q8N2C7 3258 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 FXYD6-FXYD2A0A087WZ82 144 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 IGKV3D-11A0A0A0MRZ8 115 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TMED7-TICAM2A0A0A6YYA0 188 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 CDC14CA4D256 554 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 HMSDA8MTL9 139 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 MCRIP1C9JLW8 97 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 SULT1C2O00338 296 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 GOSR2O14653 212 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ARPC5O15511 151 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR2T1O43869 369 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ZNF217O75362 1048 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 GPANK1O95872 356 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 CFDP00746 253 aaPredicted RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 HRGP04196 525 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 LPLP06858 475 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 FBXO45P0C2W1 286 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 CXCL2P19875 107 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 CSRP1P21291 193 aaKnown RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 FBLP22087 321 aaKnown RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 HTR2CP28335 458 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 CD38P28907 300 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 S100A11P31949 105 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 CSF2RBP32927 897 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR1D4P47884 311 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 DNASE1L1P49184 302 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 NR0B1P51843 470 aaKnown RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 EFNB2P52799 333 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 CAPZA1P52907 286 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TAS2R19P59542 299 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ROM1Q03395 351 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ZP2Q05996 745 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 DMWDQ09019 674 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 SMAD4Q13485 552 aaKnown RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 EIF2B1Q14232 305 aaKnown RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 EBPQ15125 230 aaKnown RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 NSDHLQ15738 373 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 MPPED2Q15777 294 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 C2orf76Q3KRA6 126 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TEX30Q5JUR7 227 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ARHGAP40Q5TG30 622 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 C1orf140Q5VVS0 124 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TMEM225Q6GV28 225 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR5M10Q6IEU7 315 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 STEAP1BQ6NZ63 245 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 DNM1P34Q6PK57 102 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ZNF627Q7L945 461 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 SLC36A1Q7Z2H8 476 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 KANSL1Q7Z3B3 1105 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ADGRG3Q86Y34 549 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TSTD1Q8NFU3 115 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR51S1Q8NGJ8 323 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR8S1Q8NH09 359 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ZNF519Q8TB69 540 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ZNF721Q8TF20 911 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 PCNPQ8WW12 178 aaKnown RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 RBPMSQ93062 196 aaKnown RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 DNAJA3Q96EY1 480 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ZNF587Q96SQ5 575 aaPredicted RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 AMELYQ99218 206 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 NUDT9Q9BW91 350 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 NRSN2Q9GZP1 204 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 WWTR1Q9GZV5 400 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 FXYD6Q9H0Q3 95 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 SLCO5A1Q9H2Y9 848 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 SCPEP1Q9HB40 452 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 APMAPQ9HDC9 416 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 VSX1Q9NZR4 365 aaPredicted RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 OPN4Q9UHM6 478 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 PFDN2Q9UHV9 154 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TMED7Q9Y3B3 224 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 IGLV1-36A0A0B4J1U3 117 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TMEM272A0A1B0GTI8 110 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 A0A1B0GW55 424 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 hCG_1807616A0A1W2PRN6 198 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TCRBV16S1A1N1A0A5B0 115 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 CIB4A0PJX0 185 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 SLC22A23A1A5C7 686 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 MEGF11A6BM72 1044 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 A6NIZ1 184 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR6C65A6NJZ3 312 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR6C76A6NM76 312 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TO15178 435 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 LILRA1O75019 489 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 RAB3DO95716 219 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 PMS2P2O95744 297 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms