RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 LOC100509620A0A075B734 347 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 A0A096LNT2 108 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 B9A039 149 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 TNFRSF11BO00300 401 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 DCTN6O00399 190 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 MPZL1O95297 269 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 GPANK1O95872 356 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 TXNDC12O95881 172 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 FAM157BP0CG42 384 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 NUDT6P53370 316 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 PSG4Q00888 419 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 RFX4Q33E94 735 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 SLC36A2Q495M3 483 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 MTX3Q5HYI7 312 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 C1orf94Q6P1W5 598 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 TMEM53Q6P2H8 277 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 DPY19L2P2Q6ZN68 376 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 ADGRG5Q8IZF4 528 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 OR10H5Q8NGA6 315 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 SAMD8Q96LT4 415 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 SYT3Q9BQG1 590 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 ZNF416Q9BWM5 594 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 REG4Q9BYZ8 158 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 MAGIXQ9H6Y5 334 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 BARX1Q9HBU1 254 aaPredicted RBP11.77□□□□□ -0.53
SNX6-203ENST00000555416 POLE4Q9NR33 117 aa11.77□□□□□ -0.53
SNX6-203ENST00000555416 XKRYO14609 159 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 SLC16A7O60669 478 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 ENTPD5O75356 428 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 GASTP01350 101 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 MSR1P21757 451 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 GLRXP35754 106 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 ERFP50548 548 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 EFNA4P52798 201 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 SNRPD2P62316 118 aaKnown RBP11.76□□□□□ -0.53
SNX6-203ENST00000555416 MAD2L1BPQ15013 274 aaPredicted RBP11.76□□□□□ -0.53
SNX6-203ENST00000555416 GPR139Q6DWJ6 353 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 CLEC9AQ6UXN8 241 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 ZNF620Q6ZNG0 422 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 DPPA2Q7Z7J5 298 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 GNPDA2Q8TDQ7 276 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 CANT1Q8WVQ1 401 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 MRPL24Q96A35 216 aaKnown RBP11.76□□□□□ -0.53
SNX6-203ENST00000555416 ERMAPQ96PL5 475 aaPredicted RBP11.76□□□□□ -0.53
SNX6-203ENST00000555416 VRK1Q99986 396 aaPredicted RBP11.76□□□□□ -0.53
SNX6-203ENST00000555416 PLA2G12AQ9BZM1 189 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 OR2H1Q9GZK4 316 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 NUAK2Q9H093 628 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 RERGLQ9H628 205 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 EGLN3Q9H6Z9 239 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 CCNB1IP1Q9NPC3 277 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 KRCC1Q9NPI7 259 aaPredicted RBP11.76□□□□□ -0.53
SNX6-203ENST00000555416 VSX1Q9NZR4 365 aaPredicted RBP11.76□□□□□ -0.53
SNX6-203ENST00000555416 TMCC3Q9ULS5 477 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 COA3Q9Y2R0 106 aaPredicted RBP11.76□□□□□ -0.53
SNX6-203ENST00000555416 CMAHPQ9Y471 501 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 PMF1-BGLAPU3KQ54 211 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 U3KQV3 271 aa11.76□□□□□ -0.53
SNX6-203ENST00000555416 NSD1Q96L73 2696 aaPredicted RBP11.76□□□□□ -0.53
SNX6-203ENST00000555416 FN1P02751 2386 aaKnown RBP11.76□□□□□ -0.53
SNX6-203ENST00000555416 GYG2O15488 501 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 KRT36O76013 467 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 F12P00748 615 aaPredicted RBP11.75□□□□□ -0.53
SNX6-203ENST00000555416 ADRA2AP08913 450 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 CST2P09228 141 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 NR2C1P13056 603 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 HIST1H1CP16403 213 aaKnown RBP11.75□□□□□ -0.53
SNX6-203ENST00000555416 WNT5AP41221 380 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 ALDH3B1P43353 468 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 HSF2Q03933 536 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 TRAP1Q12931 704 aaKnown RBP11.75□□□□□ -0.53
SNX6-203ENST00000555416 BNIP1Q12981 228 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 TSPAN31Q12999 210 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 FAM98BQ52LJ0 330 aaKnown RBP11.75□□□□□ -0.53
SNX6-203ENST00000555416 TMEM255AQ5JRV8 349 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 OR2T5Q6IEZ7 315 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 ZNF774Q6NX45 483 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 TMEM179BQ7Z7N9 219 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 ZNF101Q8IZC7 436 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 OR8D4Q8NGM9 314 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 OR2T29Q8NH02 315 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 OR4K13Q8NH42 304 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 FNDC8Q8TC99 324 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 POM121L2Q96KW2 1035 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 CADM1Q9BY67 442 aaKnown RBP11.75□□□□□ -0.53
SNX6-203ENST00000555416 TRIM15Q9C019 465 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 FN3KQ9H479 309 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 CDH20Q9HBT6 801 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 FBXL3Q9UKT7 428 aa11.75□□□□□ -0.53
SNX6-203ENST00000555416 IGLV1-36A0A0B4J1U3 117 aa11.74□□□□□ -0.53
SNX6-203ENST00000555416 IQCMA0A1B0GVH7 501 aa11.74□□□□□ -0.53
SNX6-203ENST00000555416 AHCYL1O43865 530 aa11.74□□□□□ -0.53
SNX6-203ENST00000555416 CCNB2O95067 398 aa11.74□□□□□ -0.53
SNX6-203ENST00000555416 SNAP29O95721 258 aa11.74□□□□□ -0.53
SNX6-203ENST00000555416 CLPTM1O96005 669 aa11.74□□□□□ -0.53
SNX6-203ENST00000555416 TP53P04637 393 aaPredicted RBP11.74□□□□□ -0.53
SNX6-203ENST00000555416 APEHP13798 732 aaKnown RBP11.74□□□□□ -0.53
SNX6-203ENST00000555416 CCNOP22674 350 aa11.74□□□□□ -0.53
SNX6-203ENST00000555416 STOMP27105 288 aa11.74□□□□□ -0.53
SNX6-203ENST00000555416 SLC6A6P31641 620 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms