RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ERCC1P07992 297 aaPredicted RBP10.48□□□□□ -0.73
SRP54-206ENST00000555317 CST2P09228 141 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 OR4A8P0C604 315 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 APEHP13798 732 aaKnown RBP10.48□□□□□ -0.73
SRP54-206ENST00000555317 GSTM3P21266 225 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 NR4A1P22736 598 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 CRABP1P29762 137 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 CENPAP49450 140 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 NUDT6P53370 316 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 PPP1R8Q12972 351 aaKnown RBP10.48□□□□□ -0.73
SRP54-206ENST00000555317 MICAQ29983 383 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 PABPC1L2AQ5JQF8 200 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 CLEC12AQ5QGZ9 265 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 PGM2L1Q6PCE3 622 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 ZNF620Q6ZNG0 422 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 OR4C15Q8NGM1 316 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 CANT1Q8WVQ1 401 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 NABP1Q96AH0 204 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 BDH2Q9BUT1 245 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 CADM1Q9BY67 442 aaKnown RBP10.48□□□□□ -0.73
SRP54-206ENST00000555317 SYT4Q9H2B2 425 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 PLK3Q9H4B4 646 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 ZNF442Q9H7R0 627 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 TBC1D23Q9NUY8 699 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 SLC7A8Q9UHI5 535 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 POLR1DQ9Y2S0 133 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 CMAHPQ9Y471 501 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 FKBP7Q9Y680 259 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 H7C417 338 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 IMPA2O14732 288 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 IDH3BO43837 385 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 TXNDC12O95881 172 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 CTLA4P16410 223 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 ZNF32P17041 273 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 CCNOP22674 350 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 LAP3P28838 519 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 THBS4P35443 961 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 FXYD6P3P58550 94 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 SELENOVP59797 346 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 HGFACQ04756 655 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 ADIPOQQ15848 244 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 CLEC12BQ2HXU8 276 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 FAM27BQ5VT28 67 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 C1orf146Q5VVC0 180 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 C11orf71Q6IPW1 123 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 LEG1Q6P5S2 330 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 UNQ6126/PRO20091Q6UXV3 157 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 CCDC121Q6ZUS5 278 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 GLB1L2Q8IW92 636 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 OR10G2Q8NGC3 310 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 FGFBP3Q8TAT2 258 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 GIPC3Q8TF64 312 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 TMUB1Q9BVT8 246 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 MMADHCQ9H3L0 296 aaPredicted RBP10.47□□□□□ -0.73
SRP54-206ENST00000555317 EGLN3Q9H6Z9 239 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 ZNF556Q9HAH1 456 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 DYNLRB1Q9NP97 96 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 POLE4Q9NR33 117 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 VSX1Q9NZR4 365 aaPredicted RBP10.47□□□□□ -0.73
SRP54-206ENST00000555317 EIF3KQ9UBQ5 218 aaKnown RBP10.47□□□□□ -0.73
SRP54-206ENST00000555317 TIMM10BQ9Y5J6 103 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 ZANQ9Y493 2812 aa10.47□□□□□ -0.73
SRP54-206ENST00000555317 ARPC3O15145 178 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 SSX4O60224 188 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 FKBP6O75344 327 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 GASTP01350 101 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 IGHV4-39P01824 125 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 ZNF35P13682 527 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 FOSL1P15407 271 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 STOMP27105 288 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 APEX1P27695 318 aaKnown RBP10.46□□□□□ -0.73
SRP54-206ENST00000555317 RAD52P43351 418 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 GDI2P50395 445 aaKnown RBP10.46□□□□□ -0.73
SRP54-206ENST00000555317 ERFP50548 548 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 ARHGDIAP52565 204 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 CBX1P83916 185 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 SCRN3Q0VDG4 424 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 EFNB3Q15768 340 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 RASSF6Q6ZTQ3 369 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 FOXL2NBQ6ZUU3 175 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 PTCHD4Q6ZW05 846 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 KRTAP1-3Q8IUG1 177 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 ZNF584Q8IVC4 421 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 ICA1LQ8NDH6 482 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 OR4K13Q8NH42 304 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 ZNF75AQ96N20 296 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 FOXN4Q96NZ1 517 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 VRK1Q99986 396 aaPredicted RBP10.46□□□□□ -0.73
SRP54-206ENST00000555317 WACQ9BTA9 647 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 ZNF416Q9BWM5 594 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 DGCR6LQ9BY27 220 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 OR2H1Q9GZK4 316 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 OR51B6Q9H340 312 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 EMC7Q9NPA0 242 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 VNN3Q9NY84 501 aa10.46□□□□□ -0.73
SRP54-206ENST00000555317 GDF2Q9UK05 429 aaPredicted RBP10.46□□□□□ -0.73
SRP54-206ENST00000555317 ZNF469Q96JG9 3925 aaPredicted RBP10.46□□□□□ -0.74
SRP54-206ENST00000555317 A0A1W2PPW3 197 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 TCRBV3S1A0A5B6 114 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 C5orf49A4QMS7 147 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms