RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 MSR1P21757 451 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 PAICSP22234 425 aaKnown RBP9.23□□□□□ -0.93
TMEM260-206ENST00000555046 PRKACGP22612 351 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 POU1F1P28069 291 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 CDKN2AP42771 156 aaKnown RBP9.23□□□□□ -0.93
TMEM260-206ENST00000555046 IST1P53990 364 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 FXYD6P3P58550 94 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 KRTAP10-9P60411 292 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 LSM6P62312 80 aaKnown RBP9.23□□□□□ -0.93
TMEM260-206ENST00000555046 ESRRGP62508 458 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 PIGFQ07326 219 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 SLC36A3Q495N2 470 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 ZNF672Q499Z4 452 aaPredicted RBP9.23□□□□□ -0.93
TMEM260-206ENST00000555046 MESTQ5EB52 335 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 LEG1Q6P5S2 330 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 ARL9Q6T311 187 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 SKA3Q8IX90 412 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 C1orf174Q8IYL3 243 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 PARP8Q8N3A8 854 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 ZNF611Q8N823 705 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 OR52E2Q8NGJ4 325 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 OR2T4Q8NH00 348 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 OR4K13Q8NH42 304 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 LRTOMTQ8WZ04 291 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 AKAP1Q92667 903 aaKnown RBP eCLIP9.23□□□□□ -0.93
TMEM260-206ENST00000555046 FBXW5Q969U6 566 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 RASD2Q96D21 266 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 NIPSNAP1Q9BPW8 284 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 SYT4Q9H2B2 425 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 GSX1Q9H4S2 264 aaPredicted RBP9.23□□□□□ -0.93
TMEM260-206ENST00000555046 CISD1Q9NZ45 108 aaKnown RBP9.23□□□□□ -0.93
TMEM260-206ENST00000555046 FKBP7Q9Y680 259 aa9.23□□□□□ -0.93
TMEM260-206ENST00000555046 ANK2Q01484 3957 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 FREM1Q5H8C1 2179 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 A0A1W2PPL8 197 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 SIAH2O43255 324 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 ZNF3P17036 446 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 CDAP32320 146 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 GRK5P34947 590 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 GALK2Q01415 458 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 HSF2Q03933 536 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.22□□□□□ -0.93
TMEM260-206ENST00000555046 NPRL3Q12980 569 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 SLC35F1Q5T1Q4 408 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 AGAP6Q5VW22 663 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 ZNF544Q6NX49 715 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 FAHD1Q6P587 224 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 FOXL2NBQ6ZUU3 175 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 TMEM179BQ7Z7N9 219 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 AMIGO2Q86SJ2 522 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 MDP1Q86V88 176 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 WDFY1Q8IWB7 410 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 LRRC18Q8N456 261 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 SMAP2Q8WU79 429 aaPredicted RBP9.22□□□□□ -0.93
TMEM260-206ENST00000555046 IPCEF1Q8WWN9 437 aaPredicted RBP9.22□□□□□ -0.93
TMEM260-206ENST00000555046 PYDC1Q8WXC3 89 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 PLEKHA8Q96JA3 519 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 NMNAT3Q96T66 252 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 SH3GL3Q99963 347 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 DHRS9Q9BPW9 319 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 RBM4BQ9BQ04 359 aaKnown RBP9.22□□□□□ -0.93
TMEM260-206ENST00000555046 RBM4Q9BWF3 364 aaKnown RBP9.22□□□□□ -0.93
TMEM260-206ENST00000555046 CDADC1Q9BWV3 514 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 NUAK2Q9H093 628 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 RACGAP1Q9H0H5 632 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 CXorf56Q9H5V9 222 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 RERGLQ9H628 205 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 UBTD1Q9HAC8 227 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 SRA1Q9HD15 236 aaKnown RBP9.22□□□□□ -0.93
TMEM260-206ENST00000555046 POLE4Q9NR33 117 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 NPAP1Q9NZP6 1156 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 EIF3KQ9UBQ5 218 aaKnown RBP9.22□□□□□ -0.93
TMEM260-206ENST00000555046 REV1Q9UBZ9 1251 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 ST6GALNAC2Q9UJ37 374 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 B9D1Q9UPM9 204 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 ORC6Q9Y5N6 252 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 ATP23Q9Y6H3 246 aa9.22□□□□□ -0.93
TMEM260-206ENST00000555046 IGHV1-18A0A0C4DH31 117 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 SEC14L2O76054 403 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 HLA-DQA2P01906 255 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 CECR9P0C854 216 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 CTLA4P16410 223 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 LOXP28300 417 aaPredicted RBP9.21□□□□□ -0.94
TMEM260-206ENST00000555046 APOBEC3AP31941 199 aaPredicted RBP9.21□□□□□ -0.94
TMEM260-206ENST00000555046 APLNRP35414 380 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 RAD52P43351 418 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 IDH3GP51553 393 aaPredicted RBP9.21□□□□□ -0.94
TMEM260-206ENST00000555046 SLC25A1P53007 311 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 CRISP1P54107 249 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 CDH11P55287 796 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 SELENOVP59797 346 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 NAAAQ02083 359 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 FMODQ06828 376 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 SCRN3Q0VDG4 424 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 GINS1Q14691 196 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 KCNMB1Q16558 191 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 TBC1D28Q2M2D7 210 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 PTCHD4Q6ZW05 846 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 ZBTB46Q86UZ6 589 aa9.21□□□□□ -0.94
TMEM260-206ENST00000555046 OR6V1Q8N148 313 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms