RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 DFFBO76075 338 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 SNHG28P0DPA3 235 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 FGF7P21781 194 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 HTRA4P83105 476 aaPredicted RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 RBMS2Q15434 407 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 IAH1Q2TAA2 248 aaPredicted RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM97Q5BJF2 176 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 FA2HQ7L5A8 372 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM163Q8TC26 289 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 SLC38A5Q8WUX1 472 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 NMNAT3Q96T66 252 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 OR52D1Q9H346 318 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 RYDENQ9NUL5 291 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 PCNX2A6NKB5 2137 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 A0A087WZY1 265 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 TRBV4-1A0A0J9YWV2 114 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 J3KRW8 73 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ARHGAP33O14559 1287 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 PRKRAO75569 313 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 HMGN2P05204 90 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 CYBAP13498 195 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 PSMB2P49721 201 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 OR10A3P58181 314 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ADAMTS16Q8TE57 1224 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 GABARAPL1Q9H0R8 117 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ACSS1Q9NUB1 689 aaPredicted RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 SPHK1Q9NYA1 384 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 PPT2Q9UMR5 302 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 NUMBLQ9Y6R0 609 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ZFC3H1O60293 1989 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 MT-ND4LP03901 98 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 PDGFAP04085 211 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 RD3LP0DJH9 198 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ACP2P11117 423 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 NAGAP17050 411 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 CASP3P42574 277 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM65Q6PI78 240 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF788Q6ZQV5 615 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 MRPL10Q7Z7H8 261 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 MARCH3Q86UD3 253 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 KCNG3Q8TAE7 436 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 IFI44Q8TCB0 444 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 TRUB1Q8WWH5 349 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ADAM29Q9UKF5 820 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 NRG2O14511 850 aaPredicted RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ADAM10O14672 748 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 HIST1H1TP22492 207 aaPredicted RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 SUMO1P63165 101 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 CLLU1OSQ5K130 101 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 LYPD4Q6UWN0 246 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 NPWQ8N729 165 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 FNDC8Q8TC99 324 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 BTF3L4Q96K17 158 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF583Q96ND8 569 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 YTHDF2Q9Y5A9 579 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 SMAD6O43541 496 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 FAM189A1O60320 539 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF17P17021 662 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 PROZP22891 400 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 IRS1P35568 1242 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 CEBPDP49716 269 aaPredicted RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 KRTDAPP60985 99 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 RNASEKQ6P5S7 137 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 NRSN2Q9GZP1 204 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 SLC22A11Q9NSA0 550 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF586Q9NXT0 402 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 SPO11Q9Y5K1 396 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 CNR1P21554 472 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 CD40P25942 277 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 TM4SF1P30408 202 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF486Q96H40 463 aaPredicted RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 COMMD5Q9GZQ3 224 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 NDRG3Q9UGV2 375 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 COL6A6A6NMZ7 2263 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 AKAP12Q02952 1782 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ANKUB1A6NFN9 424 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 OR5H8P0DN80 308 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 TAS2R60P59551 318 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 OXA1LQ15070 435 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 SPANXN5Q5MJ07 72 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 SPATA46Q5T0L3 261 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 DHRS7BQ6IAN0 325 aaPredicted RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 DOK3Q7L591 496 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 OR52N5Q8NH56 324 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 FUBP1Q96AE4 644 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 RPUSD4Q96CM3 377 aaKnown RBP6.34□□□□□ -1.39
SYNE2-216ENST00000555002 OR2M2Q96R28 347 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 ACPTQ9BZG2 426 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 NRIP3Q9NQ35 241 aa6.34□□□□□ -1.39
SYNE2-216ENST00000555002 GPR31O00270 319 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 GFRA2O00451 464 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 PPP3CBP16298 524 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF133P52736 654 aaPredicted RBP6.34□□□□□ -1.4
SYNE2-216ENST00000555002 WDR5P61964 334 aaKnown RBP6.34□□□□□ -1.4
SYNE2-216ENST00000555002 SOX4Q06945 474 aaPredicted RBP6.34□□□□□ -1.4
SYNE2-216ENST00000555002 FRMPD2BQ6IN97 320 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 RBPMS2Q6ZRY4 209 aaKnown RBP6.34□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF595Q8IYB9 648 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 DTWD1Q8N5C7 304 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 OR51F2Q8NH61 342 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms