RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 SMPD2O60906 423 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 FARS2O95363 451 aaKnown RBP10.68□□□□□ -0.7
SYNE2-214ENST00000554928 RAB36O95755 333 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 CRYAAP02489 173 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 APEX1P27695 318 aaKnown RBP10.68□□□□□ -0.7
SYNE2-214ENST00000554928 THBS4P35443 961 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 PTH2RP49190 550 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 NKX6-1P78426 367 aaPredicted RBP10.68□□□□□ -0.7
SYNE2-214ENST00000554928 PSG4Q00888 419 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 MEP1BQ16820 701 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 MST1LQ2TV78 715 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 PABPC1L2AQ5JQF8 200 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 C1QTNF12Q5T7M4 302 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.68□□□□□ -0.7
SYNE2-214ENST00000554928 AMIGO2Q86SJ2 522 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 LURAP1LQ8IV03 231 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 OR6V1Q8N148 313 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 LINC00471Q8N535 108 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 CYB561A3Q8NBI2 242 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 NPEPL1Q8NDH3 523 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 OR52E2Q8NGJ4 325 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 TMEM171Q8WVE6 324 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 NANOS1Q8WY41 292 aaKnown RBP10.68□□□□□ -0.7
SYNE2-214ENST00000554928 POP5Q969H6 163 aaKnown RBP10.68□□□□□ -0.7
SYNE2-214ENST00000554928 PIGTQ969N2 578 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 ZNF416Q9BWM5 594 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 NDEL1Q9GZM8 345 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 WNT5BQ9H1J7 359 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 MMADHCQ9H3L0 296 aaPredicted RBP10.68□□□□□ -0.7
SYNE2-214ENST00000554928 RNF121Q9H920 327 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 SRA1Q9HD15 236 aaKnown RBP10.68□□□□□ -0.7
SYNE2-214ENST00000554928 TBC1D23Q9NUY8 699 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 ZNF701Q9NV72 531 aaPredicted RBP10.68□□□□□ -0.7
SYNE2-214ENST00000554928 GDF2Q9UK05 429 aaPredicted RBP10.68□□□□□ -0.7
SYNE2-214ENST00000554928 EBAG9O00559 213 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 E2F6O75461 281 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 KHDRBS3O75525 346 aaKnown RBP10.67□□□□□ -0.7
SYNE2-214ENST00000554928 SERPINA5P05154 406 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 GAAP10253 952 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 PSKH1P11801 424 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 MSR1P21757 451 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 ADAM8P78325 824 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.67□□□□□ -0.7
SYNE2-214ENST00000554928 SNTB2Q13425 540 aaKnown RBP10.67□□□□□ -0.7
SYNE2-214ENST00000554928 KPNB1Q14974 876 aaKnown RBP10.67□□□□□ -0.7
SYNE2-214ENST00000554928 ADIPOQQ15848 244 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 SLC36A2Q495M3 483 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 SLC36A3Q495N2 470 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 NRN1LQ496H8 165 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 FAM27BQ5VT28 67 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 ZNF774Q6NX45 483 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 TMEM53Q6P2H8 277 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 LYPD4Q6UWN0 246 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 ADCK1Q86TW2 530 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 DEPDC4Q8N2C3 294 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 MUC15Q8N387 334 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 FNDC8Q8TC99 324 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 LRTOMTQ8WZ04 291 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 C11orf40Q8WZ69 217 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 DUS3LQ96G46 650 aaKnown RBP10.67□□□□□ -0.7
SYNE2-214ENST00000554928 KCNS3Q9BQ31 491 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 CACNG6Q9BXT2 260 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 OR2H1Q9GZK4 316 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 OR51B6Q9H340 312 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 RPRD1BQ9NQG5 326 aaKnown RBP10.67□□□□□ -0.7
SYNE2-214ENST00000554928 CA10Q9NS85 328 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 B9D1Q9UPM9 204 aa10.67□□□□□ -0.7
SYNE2-214ENST00000554928 LOC100509620A0A075B734 347 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 TMEM129A0AVI4 362 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 ARRDC5A6NEK1 342 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 AHCYL1O43865 530 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 CIB2O75838 187 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 IGHV4-39P01824 125 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 TFP02787 698 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 CST2P09228 141 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 OR4A8P0C604 315 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 NR2C1P13056 603 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 NPR2P20594 1047 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 NR4A1P22736 598 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 NOS3P29474 1203 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 APOBEC3AP31941 199 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-214ENST00000554928 PYCR1P32322 319 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 DAPP51397 102 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 ERVS71-1P61550 626 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 ATP6AP1Q15904 470 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 Q5PR19 223 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 ACSM5Q6NUN0 579 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 ZNF544Q6NX49 715 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 SHQ1Q6PI26 577 aaKnown RBP10.66□□□□□ -0.7
SYNE2-214ENST00000554928 CD300LDQ6UXZ3 194 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 SPNS3Q6ZMD2 512 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 LRP11Q86VZ4 500 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 JAZF1Q86VZ6 243 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 FBXL14Q8N1E6 418 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 LNX2Q8N448 690 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 SLC37A3Q8NCC5 494 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 SLC30A7Q8NEW0 376 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 NUP37Q8NFH4 326 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 OR52L1Q8NGH7 329 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 OR9Q1Q8NGQ5 310 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms