RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 A8MUI8 341 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PPIAL4DF5H284 164 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 F5H5T6 163 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 FCN1O00602 326 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR7A17O14581 309 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 TNFSF11O14788 317 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ANGPT2O15123 496 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 EFNA2O43921 213 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CDC40O60508 579 aaKnown RBP eCLIP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF254O75437 659 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 TM7SF2O76062 418 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 P0C879 139 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CCDC166P0CW27 439 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SERPINA2P20848 420 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ATP6V1C1P21283 382 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ZP3P21754 424 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CD82P27701 267 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CD1CP29017 333 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SOX6P35712 828 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RFC3P40938 356 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RPL29P47914 159 aaKnown RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 P2RY4P51582 365 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PLA2G16P53816 162 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 LIM2P55344 173 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PFN3P60673 137 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 MRPS11P82912 194 aaKnown RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 EWSR1Q01844 656 aaKnown RBP eCLIP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RIPPLY1Q0D2K3 151 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PJVKQ0ZLH3 352 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SNTB2Q13425 540 aaKnown RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PRR4Q16378 134 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 TATDN3Q17R31 274 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 GOLGA7BQ2TAP0 167 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 DEFB110Q30KQ9 67 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SLC36A3Q495N2 470 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RABGAP1LQ5R372 815 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 METTL11BQ5VVY1 283 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 MLIPQ5VWP3 458 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RSBN1Q5VWQ0 802 aaPredicted RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR5M10Q6IEU7 315 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ACSM5Q6NUN0 579 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 FAHD2BQ6P2I3 314 aaPredicted RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 C22orf39Q6P5X5 142 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RUFY3Q7L099 469 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 APTXQ7Z2E3 356 aaKnown RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 TAC4Q86UU9 113 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF677Q86XU0 584 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF584Q8IVC4 421 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ZDHHC21Q8IVQ6 265 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CD302Q8IX05 232 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 UBQLNLQ8IYU4 475 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RPRMLQ8N4K4 120 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR56A4Q8NGH8 313 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR10G6Q8NH81 332 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PNPT1Q8TCS8 783 aaKnown RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SLC37A2Q8TED4 501 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 AENQ8WTP8 325 aaKnown RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SPRYD4Q8WW59 207 aaPredicted RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR1E3Q8WZA6 343 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 THRSPQ92748 146 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RMND5BQ96G75 393 aaPredicted RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 FAHD2AQ96GK7 314 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 C8orf76Q96K31 380 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR5B2Q96R09 309 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SLC6A7Q99884 636 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 C19orf24Q9BVV8 132 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 DUSP16Q9BY84 665 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RAB34Q9BZG1 259 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SLITRK2Q9H156 845 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PPDPFQ9H3Y8 114 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CLSTN2Q9H4D0 955 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CAB39LQ9H9S4 337 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PAK1IP1Q9NWT1 392 aaPredicted RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SPRR3Q9UBC9 169 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CHRNA9Q9UGM1 479 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 MOKQ9UQ07 419 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SCML2Q9UQR0 700 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PDE10AQ9Y233 779 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR10H1Q9Y4A9 318 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 KIAA1549Q9HCM3 1950 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SCN3AQ9NY46 2000 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 EPPK1P58107 5090 aaKnown RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 HYDINQ4G0P3 5121 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 FAM92AA1XBS5 289 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 TLCD2A6NGC4 264 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF233A6NK53 670 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR52A4PA6NMU1 304 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 LRRIQ3A6PVS8 624 aaPredicted RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 B4DXG7 233 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 H3BMQ9 156 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 M0QYV0 167 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 WWP2O00308 870 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 HAT1O14929 419 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ZSCAN12O43309 604 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SLC19A2O60779 497 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 TBX19O60806 448 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 BCAS1O75363 584 aaPredicted RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 MTX2O75431 263 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 GPX5O75715 221 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SERF1AO75920 110 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms