RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ACTA2P62736 377 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 ACTG2P63267 376 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 TGFBR3Q03167 851 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 PIGFQ07326 219 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 FAPQ12884 760 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 GALEQ14376 348 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 IRF3Q14653 427 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 SGCAQ16586 387 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 PCK2Q16822 640 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 SLC18B1Q6NT16 456 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 TMEM154Q6P9G4 183 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 TMPRSS11AQ6ZMR5 421 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 C3P1Q6ZMU1 363 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 Q6ZT83 130 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.66□□□□□ -0.38
SHOX2-206ENST00000554685 CDC20BQ86Y33 519 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 EGFL6Q8IUX8 553 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 KLHL36Q8N4N3 616 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 OR2AJ1Q8NGZ0 328 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 OTOSQ8NHW6 89 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 SGCDQ92629 289 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 KCNN2Q9H2S1 579 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 SIAEQ9HAT2 523 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 TMEM38BQ9NVV0 291 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 MRPL22Q9NWU5 206 aaKnown RBP12.66□□□□□ -0.38
SHOX2-206ENST00000554685 ERVK13-1Q9NX77 482 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 SH3BGRL2Q9UJC5 107 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 MEMO1Q9Y316 297 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 BOD1L1Q8NFC6 3051 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 TMEM129A0AVI4 362 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 IGHV3-9P01782 118 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 OR8G3PP0DMU2 310 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 DBPQ10586 325 aaPredicted RBP12.65□□□□□ -0.38
SHOX2-206ENST00000554685 PMPCAQ10713 525 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 FOXF2Q12947 444 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 FAM27BQ5VT28 67 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 VWA1Q6PCB0 445 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 LYPD4Q6UWN0 246 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 ZNF813Q6ZN06 617 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 BEND4Q6ZU67 534 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 KCTD8Q6ZWB6 473 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 ZNF627Q7L945 461 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 DPY19L4Q7Z388 723 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 BTLAQ7Z6A9 289 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 DPPA2Q7Z7J5 298 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 RPRMLQ8N4K4 120 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 GALNT11Q8NCW6 608 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 OR52N1Q8NH53 320 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 HAVCR2Q8TDQ0 301 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 RND1Q92730 232 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 FOXN4Q96NZ1 517 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 DMRTA2Q96SC8 542 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 ZNF629Q9UEG4 869 aaPredicted RBP12.65□□□□□ -0.38
SHOX2-206ENST00000554685 PRSS50Q9UI38 385 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 OSGIN2Q9Y236 505 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 CAB39Q9Y376 341 aaPredicted RBP12.65□□□□□ -0.38
SHOX2-206ENST00000554685 ITPR1Q14643 2758 aa12.65□□□□□ -0.38
SHOX2-206ENST00000554685 A0A1W2PQL4 384 aaPredicted RBP12.64□□□□□ -0.39
SHOX2-206ENST00000554685 DVL2O14641 736 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 MSTNO14793 375 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 MPZL1O95297 269 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 GPANK1O95872 356 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 CST2P09228 141 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 HOXB1P14653 301 aaPredicted RBP12.64□□□□□ -0.39
SHOX2-206ENST00000554685 ALOX5APP20292 161 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 CDAP32320 146 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 NR1H2P55055 460 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 PCBD1P61457 104 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 EMX1Q04741 257 aaPredicted RBP12.64□□□□□ -0.39
SHOX2-206ENST00000554685 EGR3Q06889 387 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 AQP6Q13520 282 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 MTFR2Q6P444 385 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 KCTD18Q6PI47 426 aaPredicted RBP12.64□□□□□ -0.39
SHOX2-206ENST00000554685 PLEKHG7Q6ZR37 379 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 LINGO2Q7L985 606 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF367Q7RTV3 350 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 KCTD20Q7Z5Y7 419 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.64□□□□□ -0.39
SHOX2-206ENST00000554685 SYT9Q86SS6 491 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 SYS1Q8N2H4 156 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 SLC22A24Q8N4F4 322 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 SNX33Q8WV41 574 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 NABP1Q96AH0 204 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 STARD4Q96DR4 205 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 TBX5Q99593 518 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 ALG8Q9BVK2 526 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 ACOT13Q9NPJ3 140 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 TAS2R16Q9NYV7 291 aa12.64□□□□□ -0.39
SHOX2-206ENST00000554685 A0A1B0GUH1 482 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 EIF4E1BA6NMX2 242 aaKnown RBP12.63□□□□□ -0.39
SHOX2-206ENST00000554685 CGAP01215 116 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 MT-ND5P03915 603 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 TACSTD2P09758 323 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 LIMS3P0CW19 117 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 LIMS4P0CW20 117 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 B4GALT1P15291 398 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 EDNRAP25101 427 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 ETV1P50549 477 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 WNT4P56705 351 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 ARF1P84077 181 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms