RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 HMOX2P30519 316 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 STX2P32856 288 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 APOBEC1P41238 236 aaKnown RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 EVX1P49640 407 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 OR2B6P58173 313 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 UBE2NP61088 152 aaKnown RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 MRPS11P82912 194 aaKnown RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 H3F3AP84243 136 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 GUCY2DQ02846 1103 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF763Q0D2J5 394 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 MERTKQ12866 999 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 HSPB3Q12988 150 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ODF3L2Q3SX64 289 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 HIKESHIQ53FT3 197 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 HSP90B2PQ58FF3 399 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 SYT14P1Q58G82 188 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 CXorf66Q5JRM2 361 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ELFN2Q5R3F8 820 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 BEND6Q5SZJ8 279 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 CCNJQ5T5M9 372 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 REP15Q6BDI9 236 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 CASP12Q6UXS9 341 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 RPS27LQ71UM5 84 aaKnown RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 SZRD1Q7Z422 152 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ABHD12BQ7Z5M8 362 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 CARM1Q86X55 608 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 RIBC1Q8N443 379 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 POMGNT2Q8NAT1 580 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 OR4M2Q8NGB6 313 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 CDC26Q8NHZ8 85 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 MPLKIPQ8TAP9 179 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 FAM76AQ8TAV0 307 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 MAGEE2Q8TD90 523 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 CKAP2Q8WWK9 683 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ZBTB9Q96C00 473 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 LRRC58Q96CX6 371 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 FAM120BQ96EK7 910 aaKnown RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 CHMP6Q96FZ7 201 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 CMTM3Q96MX0 182 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 MS4A4EQ96PG1 132 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF317Q96PQ6 595 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF382Q96SR6 550 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 GPA33Q99795 319 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 MRPL57Q9BQC6 102 aaKnown RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 NAA11Q9BSU3 229 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 THUMPD3Q9BV44 507 aaKnown RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 C1QTNF5Q9BXJ0 243 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 EBPLQ9BY08 206 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 LAT2Q9GZY6 243 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 PIGUQ9H490 435 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 NARFLQ9H6Q4 476 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ACSS1Q9NUB1 689 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 DECR2Q9NUI1 292 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ACER3Q9NUN7 267 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 SLC9A8Q9Y2E8 581 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 HDGFL3Q9Y3E1 203 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 PPIAL4AQ9Y536 164 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 PKD1L1Q8TDX9 2849 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 ARPC4-TTLL3A0A0A6YYG9 625 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 A0A1B0GUS0 222 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 hCG_1807616A0A1W2PRN6 198 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 FAM90A8PA6NJQ4 464 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 OR6C65A6NJZ3 312 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 NPIPB9F8W1W9 429 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 CLDN34H7C241 214 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 WNT9BO14905 357 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 PPIHO43447 177 aaKnown RBP4.12□□□□□ -1.75
ATXN3-228ENST00000554592 SYNGR3O43761 229 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 KRT33AO76009 404 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 SUPT7LO94864 414 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 MPZL1O95297 269 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 IGLV1-44P01699 117 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 NUDT17P0C025 328 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 FAM90A13PP0C7W8 464 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 FAM90A24PP0C7X0 464 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 CECR9P0C854 216 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 CBR1P16152 277 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 IL7RP16871 459 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 TNFRSF1BP20333 461 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 CALCRP30988 508 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 MAGEA4P43358 317 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 SERPINB8P50452 374 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 RASSF2P50749 326 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 CCR4P51679 360 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 F2RL1P55085 397 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 SLC35A1P78382 337 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 ZP4Q12836 540 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 CALCOCO2Q13137 446 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 BAMBIQ13145 260 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 SLC17A1Q14916 467 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 NDUFAF6Q330K2 333 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 UNC50Q53HI1 259 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.12□□□□□ -1.75
ATXN3-228ENST00000554592 GKAP1Q5VSY0 366 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-228ENST00000554592 SAXO2Q658L1 398 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 NOXRED1Q6NXP6 359 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 GPRIN3Q6ZVF9 776 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 AAED1Q7RTV5 226 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms