RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 RTN4RQ9BZR6 473 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 MUC13Q9H3R2 512 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 FKRPQ9H9S5 495 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 RPF1Q9H9Y2 349 aaKnown RBP3.97□□□□□ -1.77
ATXN3-227ENST00000554491 RHOFQ9HBH0 211 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 EML4Q9HC35 981 aaKnown RBP3.97□□□□□ -1.77
ATXN3-227ENST00000554491 SIX2Q9NPC8 291 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 MIEF1Q9NQG6 463 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 SPHK2Q9NRA0 654 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 FBXO6Q9NRD1 293 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-227ENST00000554491 YAE1D1Q9NRH1 226 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 SLC2A9Q9NRM0 540 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 TMEM161AQ9NX61 479 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 RASL12Q9NYN1 266 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 AHSPQ9NZD4 102 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 HCN3Q9P1Z3 774 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 RCC2Q9P258 522 aaKnown RBP3.97□□□□□ -1.77
ATXN3-227ENST00000554491 IL17BQ9UHF5 180 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 PADI1Q9ULC6 663 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 NDRG4Q9ULP0 352 aaKnown RBP3.97□□□□□ -1.77
ATXN3-227ENST00000554491 CORO2BQ9UQ03 480 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 RNF6Q9Y252 685 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 MRPS17Q9Y2R5 130 aaKnown RBP3.97□□□□□ -1.77
ATXN3-227ENST00000554491 UBE2J1Q9Y385 318 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-227ENST00000554491 PLEKHM1Q9Y4G2 1056 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 MMP24Q9Y5R2 645 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 V9GYS6 101 aa3.97□□□□□ -1.77
ATXN3-227ENST00000554491 PTPRQQ9UMZ3 2332 aa3.96□□□□□ -1.77
ATXN3-227ENST00000554491 URB1O60287 2271 aaKnown RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 KIAA1549LQ6ZVL6 1849 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 VWA8A3KMH1 1905 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 NOTCH4Q99466 2003 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 IGLV3-22A0A075B6J6 115 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 A0A0U1RQF3 1178 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 MBLAC1A4D2B0 266 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 COLCA2A8K830 154 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF587BE7ETH6 402 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SMLR1H3BR10 107 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 K7ERU9 68 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CXCR6O00574 342 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 PIP5K1BO14986 540 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF749O43361 778 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ORC5O43913 435 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 TYROBPO43914 113 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 KIAA0513O60268 411 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ICOSLGO75144 302 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 TULP3O75386 442 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 PSMD10O75832 226 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 KDM4BO94953 1096 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 MPC2O95563 127 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 MT-ND4LP03901 98 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CD2P06729 351 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 HIST1H2AGP0C0S8 130 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 OR10J4P0C629 311 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ZSCAN5DPP0CG00 497 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SMIM10L1P0DMW3 83 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 UROSP10746 265 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF44P15621 663 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 EPORP19235 508 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 HIST1H2ADP20671 130 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 GSTM3P21266 225 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ABCD3P28288 659 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 GPR12P47775 334 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 OR3A1P47881 315 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ARRB1P49407 418 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 GLUD2P49448 558 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 PPOXP50336 477 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 BLKP51451 505 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CLCN3P51790 818 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CRYBA4P53673 196 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 MLF1P58340 268 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 EIF5AP63241 154 aaKnown RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CSNK2A1P68400 391 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 PITPNAQ00169 270 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 B4GALNT1Q00973 533 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 PTP4A2Q12974 167 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 PDZK1IP1Q13113 114 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 PMS2P11Q13670 270 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SURF2Q15527 256 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 NDUFA9Q16795 377 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 C18orf21Q32NC0 220 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ADPRMQ3LIE5 342 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 COX19Q49B96 90 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SYTL3Q4VX76 610 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 C5orf47Q569G3 176 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 C10orf91Q5T1B1 145 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 AKR1C8PQ5T2L2 129 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 OTUD1Q5VV17 481 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 HIST2H2AA3Q6FI13 130 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 KIAA0930Q6ICG6 404 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 WBP2NLQ6ICG8 309 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 LRRC8EQ6NSJ5 796 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 DOK6Q6PKX4 331 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 KLHL17Q6TDP4 642 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 PARM1Q6UWI2 310 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 WDR88Q6ZMY6 472 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 DEF8Q6ZN54 512 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CHMP1BQ7LBR1 199 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 TMEM144Q7Z5S9 345 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 LINC01551Q86U37 167 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms