RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 TFP02787 698 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 THBDP07204 575 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 KIR2DL3P43628 341 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 CAPZA2P47755 286 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 BLVRAP53004 296 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 SNRPGP62308 76 aaKnown RBP10.7□□□□□ -0.7
SHMT2-209ENST00000553949 TUBA1BP68363 451 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 TUBA4AP68366 448 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 TEKQ02763 1124 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 IL18R1Q13478 541 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 APOFQ13790 326 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 PPA1Q15181 289 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 KCNMB1Q16558 191 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 C6orf52Q5T4I8 152 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 LINC01590Q5TEZ4 76 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 AADACL4Q5VUY2 407 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 ZNF691Q5VV52 312 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 NXNL2Q5VZ03 156 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 OTPQ5XKR4 325 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 UGT2A3Q6UWM9 527 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 TUBA1AQ71U36 451 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-209ENST00000553949 DMRTC2Q8IXT2 367 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-209ENST00000553949 ENTHD1Q8IYW4 607 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 LRRC18Q8N456 261 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 ACBD4Q8NC06 268 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 MUCL1Q96DR8 90 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 ZC3HAV1LQ96H79 300 aaKnown RBP10.7□□□□□ -0.7
SHMT2-209ENST00000553949 DACH2Q96NX9 599 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 PSMG3-AS1Q96PY0 264 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 EMC7Q9NPA0 242 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 OBP2BQ9NPH6 170 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 RASSF1Q9NS23 344 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 MRPL22Q9NWU5 206 aaKnown RBP10.7□□□□□ -0.7
SHMT2-209ENST00000553949 ZNF224Q9NZL3 707 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 SLC25A15Q9Y619 301 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 LRRK2Q5S007 2527 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 CCDC182A6NF36 153 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 TVP23AA6NH52 213 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 MPZL2O60487 215 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 UBL3O95164 117 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 WNT11O96014 354 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 HRGP04196 525 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 CST2P09228 141 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 GNAO1P09471 354 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 PATE4P0C8F1 98 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 CD79AP11912 226 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 GABRB1P18505 474 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 GSTT1P30711 240 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 FMO3P31513 532 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 HSPA13P48723 471 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 RPS7P62081 194 aaKnown RBP10.69□□□□□ -0.7
SHMT2-209ENST00000553949 LSM6P62312 80 aaKnown RBP10.69□□□□□ -0.7
SHMT2-209ENST00000553949 IL5RAQ01344 420 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 ENDOGQ14249 297 aaKnown RBP10.69□□□□□ -0.7
SHMT2-209ENST00000553949 MEP1BQ16820 701 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 SLC36A2Q495M3 483 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 SLC35D3Q5M8T2 416 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 SLC25A30Q5SVS4 291 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 C1QTNF12Q5T7M4 302 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 ALKBH2Q6NS38 261 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 LYPD4Q6UWN0 246 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 MEX3BQ6ZN04 569 aaKnown RBP10.69□□□□□ -0.7
SHMT2-209ENST00000553949 MEPCEQ7L2J0 689 aaKnown RBP10.69□□□□□ -0.7
SHMT2-209ENST00000553949 SSX8Q7RTT4 187 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 SLC16A14Q7RTX9 510 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 DPPA2Q7Z7J5 298 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 GID4Q8IVV7 300 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 ZNF511Q8NB15 262 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 SETD9Q8NE22 299 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 RHOXF1Q8NHV9 184 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 FGFBP3Q8TAT2 258 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 NANOS1Q8WY41 292 aaKnown RBP10.69□□□□□ -0.7
SHMT2-209ENST00000553949 ZMYND19Q96E35 227 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-209ENST00000553949 FBXO17Q96EF6 278 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 ZNF582Q96NG8 517 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-209ENST00000553949 SPOCK3Q9BQ16 436 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 ZNF416Q9BWM5 594 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 KCNN2Q9H2S1 579 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 B3GNT2Q9NY97 397 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 DNAJC27Q9NZQ0 273 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 CRIM1Q9NZV1 1036 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 H2AFY2Q9P0M6 372 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-209ENST00000553949 AASSQ9UDR5 926 aa10.69□□□□□ -0.7
SHMT2-209ENST00000553949 GCN1Q92616 2671 aaKnown RBP10.68□□□□□ -0.7
SHMT2-209ENST00000553949 SLC22A31A6NKX4 558 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 C12orf71A8MTZ7 269 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 ENTPD6O75354 484 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 ZNF823P16415 610 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 PAX7P23759 505 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 CDH11P55287 796 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 ADAM8P78325 824 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 PIGFQ07326 219 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 MAD2L1BPQ15013 274 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-209ENST00000553949 OCLNQ16625 522 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 GSG1Q2KHT4 349 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 LCN1P1Q5VSP4 162 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 MEDAGQ5VYS4 303 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 SEZ6L2Q6UXD5 910 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 B3GLCTQ6Y288 498 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms