RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SAMSN1Q9NSI8 373 aaKnown RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 PAK1IP1Q9NWT1 392 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 CD274Q9NZQ7 290 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 WARS2Q9UGM6 360 aaKnown RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 NUP50Q9UKX7 468 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 RPL36Q9Y3U8 105 aaKnown RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 L3MBTL1Q9Y468 752 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 CACNA1HO95180 2353 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 GVINP1Q7Z2Y8 2422 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 DNAH14Q0VDD8 3507 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 CHD8Q9HCK8 2581 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 MYO5AQ9Y4I1 1855 aaKnown RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 FAM186AA6NE01 2351 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 USP27XA6NNY8 438 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 C5orf67F2Z3F1 127 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 H0YIV9 168 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 NBR2O15453 112 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF264O43296 627 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 CXCL13O43927 109 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 CDH16O75309 829 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 GNA14O95837 355 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 SERPIND1P05546 499 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 POLR2EP19388 210 aaKnown RBP2.3□□□□□ -2.04
SCFD1-210ENST00000553693 COX5AP20674 150 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 VDAC1P21796 283 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 RRM2P31350 389 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 LEPP41159 167 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 MAP3K8P41279 467 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 GPM6AP51674 278 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 NUP107P57740 925 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 DPYSL3Q14195 570 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 ANGPT1Q15389 498 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 LRRC36Q1X8D7 754 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF630Q2M218 657 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-210ENST00000553693 XKR7Q5GH72 579 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 GDPD3Q7L5L3 318 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 OTUD6AQ7L8S5 288 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 CDR2LQ86X02 465 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-210ENST00000553693 PLA2G4DQ86XP0 818 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 FNDC5Q8NAU1 212 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 CCDC148Q8NFR7 591 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 VN1R2Q8NFZ6 395 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 OR9A4Q8NGU2 314 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 RAB3IL1Q8TBN0 382 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 MAGEE2Q8TD90 523 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-210ENST00000553693 BLOC1S5Q8TDH9 187 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 STARD8Q92502 1023 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 CYP2S1Q96SQ9 504 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 ILKAPQ9H0C8 392 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-210ENST00000553693 PPA2Q9H2U2 334 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 RHBGQ9H310 441 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 CAB39LQ9H9S4 337 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 NMRAL1Q9HBL8 299 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF160Q9HCG1 818 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 NT5MQ9NPB1 228 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 MRPL22Q9NWU5 206 aaKnown RBP2.3□□□□□ -2.04
SCFD1-210ENST00000553693 KIAA1257Q9ULG3 409 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 SCML2Q9UQR0 700 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 POLDIP2Q9Y2S7 368 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 PEX16Q9Y5Y5 336 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 TANC1Q9C0D5 1861 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 USP24Q9UPU5 2620 aa2.3□□□□□ -2.04
SCFD1-210ENST00000553693 SETXQ7Z333 2677 aaKnown RBP2.3□□□□□ -2.04
SCFD1-210ENST00000553693 ACACBO00763 2458 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 MYO7AQ13402 2215 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 ATG2AQ2TAZ0 1938 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF532Q9HCE3 1301 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 TRBV6-6A0A0A6YYG2 114 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 A0A1B0GUS0 222 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 TCRBV9S1A1TA0A576 114 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 IDSB3KWA1 339 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 FOXE1O00358 373 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-210ENST00000553693 AIM2O14862 343 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 EFNA2O43921 213 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 SOX15O60248 233 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 DNAJB6O75190 326 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 FTH1P02794 183 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 MMP1P03956 469 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 KLK3P07288 261 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-210ENST00000553693 RALBP11234 206 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 ATP1B2P14415 290 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-210ENST00000553693 ETS2P15036 469 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 GCFC2P16383 781 aaKnown RBP2.29□□□□□ -2.04
SCFD1-210ENST00000553693 CALCRP30988 508 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 CD80P33681 288 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 DUSP3P51452 185 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-210ENST00000553693 C21orf59P57076 290 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 KCNJ2P63252 427 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 CCDC173Q0VFZ6 552 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 MERTKQ12866 999 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 VPS26BQ4G0F5 336 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 TTC19Q6DKK2 380 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-210ENST00000553693 OR52E8Q6IFG1 317 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 ENPP6Q6UWR7 440 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 Q6ZN92 141 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 PGAP1Q75T13 922 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 BZW1Q7L1Q6 419 aaKnown RBP2.29□□□□□ -2.04
SCFD1-210ENST00000553693 SERPINA9Q86WD7 417 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 UBALD2Q8IYN6 164 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 LINC01561Q8N1V8 128 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms