RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CHRNA6Q15825 494 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 NDUFA5Q16718 116 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 KCTD21Q4G0X4 260 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 NKAIN1Q4KMZ8 207 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 LRRC23Q53EV4 343 aaPredicted RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 HSP90AA4PQ58FG1 418 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 CARD16Q5EG05 197 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 CLVS2Q5SYC1 327 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 ZSCAN25Q6NSZ9 544 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 PEX26Q7Z412 305 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 HMGN2P46Q86SG4 172 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 AKAP14Q86UN6 197 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 C10orf67Q8IYJ2 551 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 ZNF679Q8IYX0 411 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 ZNF683Q8IZ20 524 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 CSGALNACT2Q8N6G5 542 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 ANKFN1Q8N957 763 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 SPATA4Q8NEY3 305 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 OR13C2Q8NGS9 318 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 ZFP90Q8TF47 636 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 AURKBQ96GD4 344 aaPredicted RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 ALS2CR12Q96Q35 445 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 DNTTIP1Q9H147 329 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 GBA3Q9H227 469 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 CLMPQ9H6B4 373 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 TDRD3Q9H7E2 651 aaKnown RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 EXD2Q9NVH0 621 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 PIPOXQ9P0Z9 390 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 UXTQ9UBK9 157 aaPredicted RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 SEC14L3Q9UDX4 400 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 VANGL2Q9ULK5 521 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 SLC22A14Q9Y267 594 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 STK38LQ9Y2H1 464 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 PLA2R1Q13018 1463 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 SBNO1A3KN83 1393 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 ADCY9O60503 1353 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 ROCK2O75116 1388 aaKnown RBP1.72□□□□□ -2.13
VRK1-202ENST00000553683 ABCC11Q96J66 1382 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 PEG3Q9GZU2 1588 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 TRANK1O15050 2925 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 CFAP43Q8NDM7 1665 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 TRAV40A0A0B4J280 105 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 IGHV3-66A0A0C4DH42 116 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 LOC100506127A0A0U1RQW1 187 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 A0A1B0GTQ1 180 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 ZNF716A6NP11 495 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 GOLGA8RI6L899 631 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 GPR171O14626 319 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 KMOO15229 486 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 NDUFA2O43678 99 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 PRKAB2O43741 272 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 TM7SF2O76062 418 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 CIAO1O76071 339 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 MYO1DO94832 1006 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 CDK14O94921 469 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 CSTAP01040 98 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 IFNA14P01570 189 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 BGLAPP02818 100 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 CRYGCP07315 174 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 ZNF735P0CB33 412 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 STAG3L3P0CL85 134 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 HSMCR30P0CW71 290 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 PRKACAP17612 351 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 SLC11A1P49279 550 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 GDI2P50395 445 aaKnown RBP1.72□□□□□ -2.13
VRK1-202ENST00000553683 SERPINB8P50452 374 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 TPM4P67936 248 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 DNAJC3Q13217 504 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 KLHL38Q2WGJ6 581 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 ZNF829Q3KNS6 432 aaPredicted RBP1.72□□□□□ -2.13
VRK1-202ENST00000553683 SLC36A3Q495N2 470 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 CFAP157Q5JU67 520 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 C10orf120Q5SQS8 335 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 SAPCD1Q5SSQ6 148 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 CLEC6AQ6EIG7 209 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 TMEM225Q6GV28 225 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 CES3Q6UWW8 571 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 TPGS1Q6ZTW0 290 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 C3orf62Q6ZUJ4 267 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 UTS2BQ765I0 119 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 BIVMQ86UB2 503 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 ZNF546Q86UE3 836 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 PLA2G4DQ86XP0 818 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 FAM86B1Q8N7N1 296 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 CCNYL1Q8N7R7 359 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 C15orf56Q8N910 161 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 FNDC5Q8NAU1 212 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 TTLQ8NG68 377 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 OR10G4Q8NGN3 311 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 OR2T34Q8NGX1 318 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 OR10Z1Q8NGY1 313 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 UBA3Q8TBC4 463 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 RAB3IL1Q8TBN0 382 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 TEX47Q8TBZ9 253 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 ACTRT1Q8TDG2 376 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 SCFD1Q8WVM8 642 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 ASZ1Q8WWH4 475 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 UFD1Q92890 307 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 SMARCD2Q92925 531 aa1.72□□□□□ -2.13
VRK1-202ENST00000553683 UBE2E3Q969T4 207 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms