RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	NPPA	P01160	153 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	IFNA14	P01570	189 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	HOXB5	P09067	269 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	POU2F1	P14859	743 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	ETS2	P15036	469 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	NCK1	P16333	377 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	ZNF17	P17021	662 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	TCN1	P20061	433 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	GTF2E2	P29084	291 aa	Known RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	CEACAM8	P31997	349 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	SLC1A3	P43003	542 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	MAGEA8	P43361	318 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	RPS5	P46782	204 aa	Known RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	YAP1	P46937	504 aa	Known RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	MRPL19	P49406	292 aa	Known RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	ASCL1	P50553	236 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	PSME3	P61289	254 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	CSNK2A1	P68400	391 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	SLC35A1	P78382	337 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	LIPE	Q05469	1076 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	DMTN	Q08495	405 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	EPS8	Q12929	822 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	SELENBP1	Q13228	472 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	CEACAM7	Q14002	265 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	OR1Q1	Q15612	314 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	OR7A5	Q15622	319 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	MAPK11	Q15759	364 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	ZSWIM7	Q19AV6	140 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	TRMT5	Q32P41	509 aa	Known RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	SLC25A35	Q3KQZ1	300 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	ODF3L2	Q3SX64	289 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	GLIPR1L2	Q4G1C9	344 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	LRRC23	Q53EV4	343 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	WBP2NL	Q6ICG8	309 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	GRINA	Q7Z429	371 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	PATL1	Q86TB9	770 aa	Known RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	SLC30A8	Q8IWU4	369 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	TUSC5	Q8IXB3	177 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	RNF148	Q8N7C7	305 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	CCDC197	Q8NCU1	140 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	OR2T12	Q8NG77	320 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	MPLKIP	Q8TAP9	179 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	RNF138	Q8WVD3	245 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	PROX1	Q92786	737 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	FAM162A	Q96A26	154 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	ZNF524	Q96C55	264 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	NTNG2	Q96CW9	530 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	NSL1	Q96IY1	281 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	CMTM3	Q96MX0	182 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	MCHR1	Q99705	422 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	KCTD14	Q9BQ13	255 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	CCDC106	Q9BWC9	280 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	C1QTNF5	Q9BXJ0	243 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	SRXN1	Q9BYN0	137 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	ZNF385D	Q9H6B1	395 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	MCCC2	Q9HCC0	563 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	BCL2L10	Q9HD36	194 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	DECR2	Q9NUI1	292 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	TMEM181	Q9P2C4	612 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	ZNF629	Q9UEG4	869 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	CHRNA9	Q9UGM1	479 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	OSGIN1	Q9UJX0	560 aa		4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-222	ENST00000553570	CRYBG3	Q68DQ2	2970 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CENPE	Q02224	2701 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	COL12A1	Q99715	3063 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570		A0A1W2PNV4	684 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	hCG_1807616	A0A1W2PRN6	198 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CIB4	A0PJX0	185 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	ELOVL7	A1L3X0	281 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	FAM90A8P	A6NJQ4	464 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570		A8MVM7	634 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CXCR6	O00574	342 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	KPNA4	O00629	521 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	NDUFAB1	O14561	156 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	ADAMDEC1	O15204	470 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	SLC22A2	O15244	555 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	KCNAB3	O43448	404 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	SERPINI2	O75830	405 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	MFN2	O95140	757 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	AKR7A3	O95154	331 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	OR6A2	O95222	327 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	AHSA1	O95433	338 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	IGHV3-9	P01782	118 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	HIST1H2AB	P04908	130 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	IGKV2-30	P06310	120 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	GPI	P06744	558 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	YES1	P07947	543 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	GUSB	P08236	651 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	FAM90A13P	P0C7W8	464 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	FAM90A24P	P0C7X0	464 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	UMPS	P11172	480 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	NQO1	P15559	274 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	KLK2	P20151	261 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	TNFRSF1B	P20333	461 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	AHCY	P23526	432 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms