RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 GLB1L2Q8IW92 636 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 IZUMO1Q8IYV9 350 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 SLC25A45Q8N413 288 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 KLHDC3Q9BQ90 382 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 ZNF436Q9C0F3 470 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-205ENST00000553474 DLL4Q9NR61 685 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 KLK11Q9UBX7 282 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 PCNX3Q9H6A9 2034 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 DMDP11532 3685 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 LOC100289279A0A1B0GTE1 492 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 GGT3PA6NGU5 568 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 A6NL46 340 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 AGRPO00253 132 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 SULT1C2O00338 296 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 GMDSO60547 372 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 ICMTO60725 284 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 HRGP04196 525 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 MAS1P04201 325 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 ISG15P05161 165 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 CXCL3P19876 107 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 MPLP40238 635 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 RBMS2Q15434 407 aaKnown RBP11.61□□□□□ -0.55
SHMT2-205ENST00000553474 GLT8D1Q68CQ7 371 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 FAM166AQ6J272 317 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 POMZP3Q6PJE2 187 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 COX15Q7KZN9 410 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 CATSPERDQ86XM0 798 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 APCDD1LQ8NCL9 501 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 OR52N5Q8NH56 324 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 STT3BQ8TCJ2 826 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 DUSP19Q8WTR2 217 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 RNF138Q8WVD3 245 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 DACT3Q96B18 629 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-205ENST00000553474 DDIT4LQ96D03 193 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 ZNF587Q96SQ5 575 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-205ENST00000553474 ELF4Q99607 663 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-205ENST00000553474 DUSP23Q9BVJ7 150 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 SLC7A5P2Q9GIP4 190 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 NOX3Q9HBY0 568 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 NPDC1Q9NQX5 325 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-205ENST00000553474 MRPL22Q9NWU5 206 aaKnown RBP11.61□□□□□ -0.55
SHMT2-205ENST00000553474 ELF5Q9UKW6 265 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-205ENST00000553474 DHDHQ9UQ10 334 aa11.61□□□□□ -0.55
SHMT2-205ENST00000553474 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 SMLR1H3BR10 107 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 AKR7A2O43488 359 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 CREBL2O60519 120 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-205ENST00000553474 CTAG2O75638 210 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 ONECUT2O95948 504 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 SPARCP09486 303 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 GIMD1P0DJR0 217 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 CTLA4P16410 223 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 DNASE1P24855 282 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 CCKBRP32239 447 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 PTGS2P35354 604 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 MAGEB1P43366 347 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 PER3P56645 1201 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 RAB11BQ15907 218 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 TRIM61Q5EBN2 209 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 C1orf189Q5VU69 101 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 SFRP4Q6FHJ7 346 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-205ENST00000553474 H1FNTQ75WM6 255 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-205ENST00000553474 SERPINA12Q8IW75 414 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 OR5L2Q8NGL0 311 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 ASB13Q8WXK3 278 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 PTX4Q96A99 478 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 AMELYQ99218 206 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 ABHD6Q9BV23 337 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 POTEKPQ9BYX7 375 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 SLCO5A1Q9H2Y9 848 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 CTSFQ9UBX1 484 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 ZNF107Q9UII5 783 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-205ENST00000553474 ASXL3Q9C0F0 2248 aa11.6□□□□□ -0.55
SHMT2-205ENST00000553474 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-205ENST00000553474 ADAM10O14672 748 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 PLGP00747 810 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-205ENST00000553474 GIPP09681 153 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-205ENST00000553474 ZNF823P16415 610 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 DCTDP32321 178 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 VEGFCP49767 419 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 ACTBP60709 375 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 GPR85P60893 370 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 ACTG1P63261 375 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 EIF2B1Q14232 305 aaKnown RBP11.59□□□□□ -0.55
SHMT2-205ENST00000553474 SLC25A53Q5H9E4 307 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 PRAMEF17Q5VTA0 474 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 TCEAL6Q6IPX3 200 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 TEX261Q6UWH6 196 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 ZNF704Q6ZNC4 412 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-205ENST00000553474 LANCL3Q6ZV70 420 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 ANKRD37Q7Z713 158 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 CDH26Q8IXH8 852 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 NKAIN3Q8N8D7 197 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 NFAM1Q8NET5 270 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-205ENST00000553474 OR51A4Q8NGJ6 313 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 TCEAL3Q969E4 200 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 FAM3DQ96BQ1 224 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 FOXRED1Q96CU9 486 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-205ENST00000553474 SCPEP1Q9HB40 452 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 HHLA2Q9UM44 414 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms