RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, human

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK4-215	ENST00000553237	ALG12	Q9BV10	488 aa		13.63	□□□□□ -0.23
CDK4-215	ENST00000553237	SHARPIN	Q9H0F6	387 aa		13.63	□□□□□ -0.23
CDK4-215	ENST00000553237	LRMDA	Q9H2I8	198 aa		13.63	□□□□□ -0.23
CDK4-215	ENST00000553237	C1orf198	Q9H425	327 aa		13.63	□□□□□ -0.23
CDK4-215	ENST00000553237	SMURF2	Q9HAU4	748 aa		13.63	□□□□□ -0.23
CDK4-215	ENST00000553237	MAGEL2	Q9UJ55	1249 aa		13.63	□□□□□ -0.23
CDK4-215	ENST00000553237	KCNS2	Q9ULS6	477 aa		13.63	□□□□□ -0.23
CDK4-215	ENST00000553237	SAMD4A	Q9UPU9	718 aa	Known RBP	13.63	□□□□□ -0.23
CDK4-215	ENST00000553237	MALRD1	Q5VYJ5	2156 aa		13.63	□□□□□ -0.23
CDK4-215	ENST00000553237	CDC42EP2	O14613	210 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	IGHM	P01871	453 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	FAM157C	P0CG43	387 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	CALB2	P22676	271 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	IGFBP5	P24593	272 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	LAP3	P28838	519 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	IL2RG	P31785	369 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	RAD52	P43351	418 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	CHN2	P52757	468 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	UCP2	P55851	309 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	SELENOV	P59797	346 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	RIN1	Q13671	783 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	NKPD1	Q17RQ9	610 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	THEM4	Q5T1C6	240 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	RRM2B	Q7LG56	351 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	AKR7L	Q8NHP1	331 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	SYNPR	Q8TBG9	265 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	C11orf40	Q8WZ69	217 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	TMEM160	Q9NX00	188 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	ENPP4	Q9Y6X5	453 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	COL6A5	A8TX70	2615 aa		13.62	□□□□□ -0.23
CDK4-215	ENST00000553237	FBN1	P35555	2871 aa	Known RBP	13.61	□□□□□ -0.23
CDK4-215	ENST00000553237		A0A1W2PPL8	197 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237		H7C1C5	153 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	ARPC2	O15144	300 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	MGRN1	O60291	552 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	SNAP29	O95721	258 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	TACSTD2	P09758	323 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	NR2C1	P13056	603 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	STOM	P27105	288 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	RPL4	P36578	427 aa	Known RBP	13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	SLC9A3	P48764	834 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	LCN6	P62502	163 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	PSG4	Q00888	419 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	CCNI	Q14094	377 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	SPATS1	Q496A3	300 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	FAM27B	Q5VT28	67 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	RINL	Q6ZS11	566 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	CXXC5	Q7LFL8	322 aa	Known RBP	13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	CYP4Z1	Q86W10	505 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	ZNF519	Q8TB69	540 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	C7orf34	Q96L11	122 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	NDUFAF4	Q9P032	175 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	LPAR3	Q9UBY5	353 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	ADAM18	Q9Y3Q7	739 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237		V9GYQ6	96 aa		13.61	□□□□□ -0.23
CDK4-215	ENST00000553237	C5orf49	A4QMS7	147 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237		A6NIZ1	184 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	NCR1	O76036	304 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	ZNF250	P15622	560 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	ZNF26	P17031	533 aa	Predicted RBP	13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	GUCA1A	P43080	201 aa	Predicted RBP	13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	MAGEB1	P43366	347 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	KLF3	P57682	345 aa	Predicted RBP	13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	RAP1B	P61224	184 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	RAP1A	P62834	184 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	ANKDD1A	Q495B1	522 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	ZBED5	Q49AG3	693 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	FAM120AOS	Q5T036	256 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	FAM205BP	Q63HN1	556 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	TMPRSS11F	Q6ZWK6	438 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	TRPM8	Q7Z2W7	1104 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	OR1J1	Q8NGS3	322 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	SLC7A13	Q8TCU3	470 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	RDH5	Q92781	318 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	YIPF5	Q969M3	257 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	PYURF	Q96I23	114 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	FAM46A	Q96IP4	442 aa	Known RBP	13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	POM121L2	Q96KW2	1035 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237		Q96M85	177 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	NSMCE2	Q96MF7	247 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	BCL2L14	Q9BZR8	327 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	WNT5B	Q9H1J7	359 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	NARFL	Q9H6Q4	476 aa		13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	HINT3	Q9NQE9	182 aa	Known RBP	13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	FAM32A	Q9Y421	112 aa	Known RBP	13.6	□□□□□ -0.23
CDK4-215	ENST00000553237	DNHD1	Q96M86	4753 aa		13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	IGLV3-9	A0A075B6K5	115 aa		13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	LOC100509620	A0A075B734	347 aa		13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	RNF212B	A8MTL3	300 aa		13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	DIRAS1	O95057	198 aa		13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	SCG5	P05408	212 aa		13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	H1F0	P07305	194 aa	Known RBP	13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	CD14	P08571	375 aa		13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	RHCE	P18577	417 aa		13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	WNT5A	P41221	380 aa		13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	GPR6	P46095	362 aa	Predicted RBP	13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	GDI2	P50395	445 aa	Known RBP	13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	GLO1	Q04760	184 aa		13.59	□□□□□ -0.23
CDK4-215	ENST00000553237	FGD3	Q5JSP0	725 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms