RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	MS4A15	Q8N5U1	240 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR52N5	Q8NH56	324 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	RNF128	Q8TEB7	428 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZFAND2B	Q8WV99	257 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	TMEM45B	Q96B21	275 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	DCLRE1C	Q96SD1	692 aa	Known RBP	11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	AMELY	Q99218	206 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	MED18	Q9BUE0	208 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	ABHD6	Q9BV23	337 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	HDHD5	Q9BXW7	423 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	SLIRP	Q9GZT3	109 aa	Known RBP	11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	KCNN2	Q9H2S1	579 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	EXO5	Q9H790	373 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	SLCO1C1	Q9NYB5	712 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	MCTS1	Q9ULC4	181 aa	Known RBP	11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	A3GALT2	U3KPV4	340 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	PMF1-BGLAP	U3KQ54	211 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	FAM186A	A6NE01	2351 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	TRBV2	A0A0J9YWF9	115 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	CD8B2	A6NJW9	211 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	GPR171	O14626	319 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	TMCC2	O75069	709 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	CD8B	P10966	210 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	CPN1	P15169	458 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	SOX6	P35712	828 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	SELENOP	P49908	381 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF169	Q14929	603 aa	Predicted RBP	11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	PHYHD1	Q5SRE7	291 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	LIPN	Q5VXI9	398 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	OTP	Q5XKR4	325 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	FOXL2NB	Q6ZUU3	175 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	AAED1	Q7RTV5	226 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF679	Q8IYX0	411 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	MCFD2	Q8NI22	146 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	GHSR	Q92847	366 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	RNF166	Q96A37	237 aa	Predicted RBP	11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	WDYHV1	Q96HA8	205 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	CDADC1	Q9BWV3	514 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	NXF2	Q9GZY0	626 aa	Known RBP	11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	ELOVL3	Q9HB03	270 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	GALNT8	Q9NY28	637 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	EMC3	Q9P0I2	261 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	SPRR3	Q9UBC9	169 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	UGT2A1	Q9Y4X1	527 aa		11.25	□□□□□ -0.61
CACNB3-223	ENST00000552480	DHH	O43323	396 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF254	O75437	659 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	SC5D	O75845	299 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	RPP14	O95059	124 aa	Known RBP	11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	CDRT1	O95170	752 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	RPS19	P39019	145 aa	Known RBP	11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	EIF2S3	P41091	472 aa	Known RBP	11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	ID4	P47928	161 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF84	P51523	738 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	RIDA	P52758	137 aa	Known RBP	11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	NANOS3	P60323	173 aa	Known RBP	11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	ALKBH1	Q13686	389 aa	Known RBP	11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	MOG	Q16653	247 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF404	Q494X3	552 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	FDX2	Q6P4F2	183 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	PAMR1	Q6UXH9	720 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	LRRN1	Q6UXK5	716 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	CHMP1B	Q7LBR1	199 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	DCXR	Q7Z4W1	244 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	KRT77	Q7Z794	578 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	LINC00346	Q8IVM7	164 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	ABHD4	Q8TB40	342 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	ST7L	Q8TDW4	575 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	MRO	Q9BYG7	248 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	ULBP2	Q9BZM5	246 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	MMP27	Q9H306	513 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	SEC61A2	Q9H9S3	476 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	RNF122	Q9H9V4	155 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	B3GAT2	Q9NPZ5	323 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	POLE4	Q9NR33	117 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	CYB5R1	Q9UHQ9	305 aa		11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480	RIF1	Q5UIP0	2472 aa	Known RBP	11.24	□□□□□ -0.61
CACNB3-223	ENST00000552480		A0A1B0GVC2	190 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	GATB	O75879	557 aa	Known RBP	11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	CDA	P32320	146 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	RORC	P51449	518 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	LSM6	P62312	80 aa	Known RBP	11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	INSL4	Q14641	139 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	RNPS1	Q15287	305 aa	Known RBP	11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	C3AR1	Q16581	482 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF544	Q6NX49	715 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	DEGS2	Q6QHC5	323 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480		Q6ZS92	163 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	CEACAM19	Q7Z692	300 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	GPR137C	Q8N3F9	429 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR6Q1	Q8NGQ2	317 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR2AJ1	Q8NGZ0	328 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	ABHD3	Q8WU67	409 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	RNF133	Q8WVZ7	376 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	SLC25A46	Q96AG3	418 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF775	Q96BV0	537 aa	Predicted RBP	11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	MAP6	Q96JE9	813 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	DCBLD2	Q96PD2	775 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	PRRG4	Q9BZD6	226 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	NELFA	Q9H3P2	528 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	C1orf198	Q9H425	327 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms