RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 NECAP2Q9NVZ3 263 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 AURKAIP1Q9NWT8 199 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 MARCOQ9UEW3 520 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.48□□□□□ -1.69
HOXB3-213ENST00000552000 IL20RAQ9UHF4 553 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 GPR45Q9Y5Y3 372 aa4.48□□□□□ -1.69
HOXB3-213ENST00000552000 HUWE1Q7Z6Z7 4374 aaKnown RBP4.47□□□□□ -1.69
HOXB3-213ENST00000552000 RYR1P21817 5038 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 CDHR4A6H8M9 788 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 ZNF726A6NNF4 738 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 CEACAM18A8MTB9 384 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 MS4A18H0YCH9 400 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 RNASET2O00584 256 aaKnown RBP4.47□□□□□ -1.69
HOXB3-213ENST00000552000 PLIN3O60664 434 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 FZD7O75084 574 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 GLRA3O75311 464 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 MPIG6BO95866 241 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 IGHV4-59P01825 116 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 CHRNGP07510 517 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 ADH4P08319 380 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 NR2F1P10589 423 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 G6PDP11413 515 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 CPA3P15088 417 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 NQO1P15559 274 aaKnown RBP4.47□□□□□ -1.69
HOXB3-213ENST00000552000 RPS2P15880 293 aaKnown RBP4.47□□□□□ -1.69
HOXB3-213ENST00000552000 CCNOP22674 350 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 ARRB2P32121 409 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 MDH2P40926 338 aaKnown RBP4.47□□□□□ -1.69
HOXB3-213ENST00000552000 PCBP3P57721 371 aaKnown RBP4.47□□□□□ -1.69
HOXB3-213ENST00000552000 FGF12P61328 243 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 BTG1P62324 171 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 GNB2P62879 340 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 TNFAIP6P98066 277 aaPredicted RBP4.47□□□□□ -1.69
HOXB3-213ENST00000552000 HOXC5Q00444 222 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 TBC1D28Q2M2D7 210 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 MS4A18Q3C1V0 323 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 ZNF718Q3SXZ3 478 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 UGT3A2Q3SY77 523 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 XKR7Q5GH72 579 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 FAM69AQ5T7M9 428 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 GPR157Q5UAW9 335 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 TMEM53Q6P2H8 277 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 FKBP9P1Q75LS8 142 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 PIWIL3Q7Z3Z3 882 aaKnown RBP4.47□□□□□ -1.69
HOXB3-213ENST00000552000 SERPINA11Q86U17 422 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 C10orf107Q8IVU9 208 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 PEX5LQ8IYB4 626 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 CLIP4Q8N3C7 705 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 SLC22A24Q8N4F4 322 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 OR1J2Q8NGS2 313 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 OR1J1Q8NGS3 322 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 TBC1D15Q8TC07 691 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 AGR3Q8TD06 166 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 ACMSDQ8TDX5 336 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 RAB40AQ8WXH6 277 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 DYRK2Q92630 601 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 DHRS1Q96LJ7 313 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 C3orf30Q96M34 536 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 WWC2-AS2Q96NR7 200 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 SLC35A5Q9BS91 424 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 SSBP3Q9BWW4 388 aaPredicted RBP4.47□□□□□ -1.69
HOXB3-213ENST00000552000 LRMDAQ9H2I8 198 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 CNTD2Q9H8S5 307 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 NANOGQ9H9S0 305 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 MSL2Q9HCI7 577 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 TCF7L2Q9NQB0 619 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 TBK1Q9UHD2 729 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 DCDC2Q9UHG0 476 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 LRCH1Q9Y2L9 728 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 POMT1Q9Y6A1 747 aa4.47□□□□□ -1.69
HOXB3-213ENST00000552000 TRAV36DV7A0A075B6V5 113 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 A0A087WUJ7 227 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 KIR2DS1A0A191URI9 304 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 LOC102725191A0A1B0GVB3 256 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 IQCMA0A1B0GVH7 501 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 A0A1W2PPM1 405 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 PRSS47A8MTI9 375 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 DHHO43323 396 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 TBX1O43435 398 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 OR2T1O43869 369 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 MFN2O95140 757 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 ZNF205O95201 554 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 SNAP29O95721 258 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 CD55P08174 381 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 WNT2P09544 360 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 APLNRP35414 380 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 WNT5AP41221 380 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 CLDN8P56748 225 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 RPL15P61313 204 aaKnown RBP4.46□□□□□ -1.7
HOXB3-213ENST00000552000 HSF2Q03933 536 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 LARS2Q15031 903 aaKnown RBP4.46□□□□□ -1.7
HOXB3-213ENST00000552000 LIN52Q52LA3 116 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 TTMPQ5BVD1 217 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 DHRS7BQ6IAN0 325 aaPredicted RBP4.46□□□□□ -1.7
HOXB3-213ENST00000552000 ZNF774Q6NX45 483 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 C8orf74Q6P047 294 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 MZT2AQ6P582 158 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 NHLRC1Q6VVB1 395 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 WDR88Q6ZMY6 472 aa4.46□□□□□ -1.7
HOXB3-213ENST00000552000 Q6ZTK2 550 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms