RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 SMIM11AP58511 58 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 MERTKQ12866 999 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 SELENBP1Q13228 472 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 DGCR6Q14129 220 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 TRAM2Q15035 370 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 ZIK1Q3SY52 487 aaPredicted RBP5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 RIPPLY2Q5TAB7 128 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 RAET1LQ5VY80 246 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 OR2T5Q6IEZ7 315 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 C3orf33Q6P1S2 294 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 C5orf46Q6UWT4 87 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 OR2T29Q8NH02 315 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 R3HDM4Q96D70 268 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 DAZAP1Q96EP5 407 aaKnown RBP5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC41A3Q96GZ6 507 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 HS6ST2Q96MM7 605 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 SFXN2Q96NB2 322 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 NPAS1Q99742 590 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 FUZQ9BT04 418 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 TMEM43Q9BTV4 400 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 FNDC11Q9BVV2 318 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC19A3Q9BZV2 496 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 DEFB127Q9H1M4 99 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 NMNAT1Q9HAN9 279 aaPredicted RBP5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 CTPS2Q9NRF8 586 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 SERINC1Q9NRX5 453 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 MAN2C1Q9NTJ4 1040 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 SELENONQ9NZV5 590 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 DNAJB9Q9UBS3 223 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 CHRNA9Q9UGM1 479 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC7A7Q9UM01 511 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 TMED7Q9Y3B3 224 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF337Q9Y3M9 751 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 LIPGQ9Y5X9 500 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 SPIN1Q9Y657 262 aaPredicted RBP5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 A0A1W2PPL8 197 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 TMEM72A0PK05 275 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 GJE1A6NN92 205 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 A8MVM7 634 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 TCF21O43680 179 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 NPIPB7O75200 414 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 DIRAS1O95057 198 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 VENTXO95231 258 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 GADD45GO95257 159 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 CST1P01037 141 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 MT-ND1P03886 318 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 PEPDP12955 493 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF708P17019 499 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 FASP25445 335 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 LOXP28300 417 aaPredicted RBP5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 RRM2P31350 389 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 YAP1P46937 504 aaKnown RBP5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 LHX2P50458 406 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 CLDN18P56856 261 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 ELF3P78545 371 aaPredicted RBP5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 SORDQ00796 357 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 EGR4Q05215 589 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 CRYZQ08257 329 aaKnown RBP5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 ATP6AP1Q15904 470 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 TMEM249Q2WGJ8 235 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 SYT14P1Q58G82 188 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 CEP78Q5JTW2 689 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC18B1Q6NT16 456 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 TTC33Q6PID6 262 aaPredicted RBP5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 WDR88Q6ZMY6 472 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 MBOAT2Q6ZWT7 520 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 IZUMO1Q8IYV9 350 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 RNF113BQ8IZP6 322 aaKnown RBP5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 GALNT4Q8N4A0 578 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 OR5M1Q8NGP8 315 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 OR6S1Q8NH40 331 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC7A13Q8TCU3 470 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 TMEM239Q8WW34 195 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 PYDC1Q8WXC3 89 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 ACOT11Q8WXI4 607 aaPredicted RBP5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 STMN2Q93045 179 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 ABTB1Q969K4 478 aaPredicted RBP5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 DDIT4LQ96D03 193 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 DACH2Q96NX9 599 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 SNX18Q96RF0 628 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 EPYCQ99645 322 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 POTEKPQ9BYX7 375 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 NTN4Q9HB63 628 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 S100A14Q9HCY8 104 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 PAQR5Q9NXK6 330 aaPredicted RBP5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 SPRR3Q9UBC9 169 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 TRAPPC4Q9Y296 219 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC6A5Q9Y345 797 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 HDGFL3Q9Y3E1 203 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 LYVE1Q9Y5Y7 322 aa5.65□□□□□ -1.5
DEPDC4-210ENST00000551642 IGKV1D-42A0A075B6H8 117 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 TRAV36DV7A0A075B6V5 113 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 A0A087WUU8 490 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 A0A0J9YW62 118 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 SH3PXD2BA1X283 911 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 ARRDC5A6NEK1 342 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 BCKDKO14874 412 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 CLOCKO15516 846 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 DNPH1O43598 174 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 OR2T1O43869 369 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms