RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ZNF321PQ8N8H1 164 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 DNAAF3Q8N9W5 541 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 CCDC26Q8TAB7 109 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 SLC22A8Q8TCC7 542 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 PSMG2Q969U7 264 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 FAF2Q96CS3 445 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 CELF6Q96J87 481 aaKnown RBP4.14□□□□□ -1.75
CPSF6-206ENST00000550987 MTMR9Q96QG7 549 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 CCT8L2Q96SF2 557 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 CITED1Q99966 193 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 C19orf24Q9BVV8 132 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 SLITRK2Q9H156 845 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 RGS18Q9NS28 235 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 NUDT15Q9NV35 164 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 CHMP5Q9NZZ3 219 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 PHF11Q9UIL8 331 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 GINS2Q9Y248 185 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 ATP6V1DQ9Y5K8 247 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 CCDC171Q6TFL3 1326 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 A0A075B6Q4 140 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 IGKV3D-15A0A087WSY6 115 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 PP2D1A8MPX8 630 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 TCP11X1B4DZS4 312 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 K7ERQ8 282 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 SULT1B1O43704 296 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 HCN1O60741 890 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 GPX5O75715 221 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 CLDN9O95484 217 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 SLC35E2P0CK97 266 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 CASP14P31944 242 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 UGT1A5P35504 534 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 MAGEA1P43355 309 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 XCR1P46094 333 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 TPMTP51580 245 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 RUNX3Q13761 415 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 COTL1Q14019 142 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 DPYSL3Q14195 570 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 PON2Q15165 354 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 ALX1Q15699 326 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 Q6ZTC4 211 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 NCCRP1Q6ZVX7 275 aaPredicted RBP4.13□□□□□ -1.75
CPSF6-206ENST00000550987 DHDDSQ86SQ9 333 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 SLC47A2Q86VL8 602 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 NRMQ8IXM6 262 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 C9orf40Q8IXQ3 194 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 SLC39A11Q8N1S5 342 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 ALLCQ8N6M5 410 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 CEP112Q8N8E3 955 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 FAM83FQ8NEG4 500 aaPredicted RBP4.13□□□□□ -1.75
CPSF6-206ENST00000550987 BBS1Q8NFJ9 593 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 DDI1Q8WTU0 396 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 DNAJA4Q8WW22 397 aaPredicted RBP4.13□□□□□ -1.75
CPSF6-206ENST00000550987 UBE2E3Q969T4 207 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 SERAC1Q96JX3 654 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 IL4I1Q96RQ9 567 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 RBM4BQ9BQ04 359 aaKnown RBP4.13□□□□□ -1.75
CPSF6-206ENST00000550987 PSTPIP2Q9H939 334 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 NHEJ1Q9H9Q4 299 aaPredicted RBP4.13□□□□□ -1.75
CPSF6-206ENST00000550987 GNB4Q9HAV0 340 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 WARS2Q9UGM6 360 aaKnown RBP4.13□□□□□ -1.75
CPSF6-206ENST00000550987 PDE10AQ9Y233 779 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 PLLPQ9Y342 182 aa4.13□□□□□ -1.75
CPSF6-206ENST00000550987 SERTM2A0A1B0GWG4 89 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 ERICH2A1L162 156 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 DHRS7CA6NNS2 312 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 SPECC1L-ADORA2AF8WAN1 911 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 ZBTB5O15062 677 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 CXCL13O43927 109 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 PRKYO43930 277 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 NIPSNAP2O75323 286 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF24P17028 368 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 TNNI1P19237 187 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 CD80P33681 288 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 OR1G1P47890 313 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 STARP49675 285 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 PRKXP51817 358 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 PLTPP55058 493 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 EIF3EP60228 445 aaKnown RBP4.12□□□□□ -1.75
CPSF6-206ENST00000550987 UBE2IP63279 158 aaKnown RBP4.12□□□□□ -1.75
CPSF6-206ENST00000550987 BASP1P80723 227 aaKnown RBP4.12□□□□□ -1.75
CPSF6-206ENST00000550987 PAX2Q02962 417 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 CD47Q08722 323 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 TGIF1Q15583 401 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 ZSCAN26Q16670 478 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 GLYR1Q49A26 553 aaPredicted RBP4.12□□□□□ -1.75
CPSF6-206ENST00000550987 C6orf226Q5I0X4 101 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 LIN9Q5TKA1 542 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 OR5M10Q6IEU7 315 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 FAM199XQ6PEV8 388 aaPredicted RBP4.12□□□□□ -1.75
CPSF6-206ENST00000550987 UQCC3Q6UW78 93 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 CD302Q8IX05 232 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 ITFG1Q8TB96 612 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 ANKRD7Q92527 254 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 ELSPBP1Q96BH3 223 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 APOL2Q9BQE5 337 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 NUP58Q9BVL2 599 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 AZI2Q9H6S1 392 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 SYNDIG1Q9H7V2 258 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 MIEF1Q9NQG6 463 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 KLHL28Q9NXS3 571 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms