RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 NTN4Q9HB63 628 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 ZDHHC8Q9ULC8 765 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 UGT2A1Q9Y4X1 527 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 C5orf49A4QMS7 147 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 HTR3EA5X5Y0 456 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 WIPF1O43516 503 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 UBOX5O94941 541 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 OR5F1O95221 314 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 CD55P08174 381 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 THRBP10828 461 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 ZNF32P17041 273 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 ADRA2CP18825 462 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 MAKP20794 623 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 CCNOP22674 350 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 WNT5AP41221 380 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 GDI2P50395 445 aaKnown RBP10.9□□□□□ -0.66
PTCH1-221ENST00000550914 CRYBA2P53672 197 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 GLO1Q04760 184 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 NFYCQ13952 458 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 VMACQ2NL98 169 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 TUSC1Q2TAM9 212 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 ZMAT1Q5H9K5 638 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 FAM27BQ5VT28 67 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 ALDH16A1Q8IZ83 802 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 OR10A6Q8NH74 314 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 KLF14Q8TD94 323 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-221ENST00000550914 IPCEF1Q8WWN9 437 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-221ENST00000550914 CCL17Q92583 94 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 GTF3AQ92664 365 aaKnown RBP10.9□□□□□ -0.66
PTCH1-221ENST00000550914 SGTBQ96EQ0 304 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 SLC6A7Q99884 636 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 TXNIPQ9H3M7 391 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 C7orf69Q9H7B7 122 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 OPN4Q9UHM6 478 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 KLHL21Q9UJP4 597 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 BAG5Q9UL15 447 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 CACNG2Q9Y698 323 aa10.9□□□□□ -0.66
PTCH1-221ENST00000550914 LOC100509620A0A075B734 347 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 ZSCAN5BA6NJL1 495 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 SPRY3O43610 288 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 FOXH1O75593 365 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 PRSS23O95084 383 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 SLC2A10O95528 541 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 CST2P09228 141 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 CDAP32320 146 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 MPV17P39210 176 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 AQP2P41181 271 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 GZMMP51124 257 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 PCBD1P61457 104 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 PSG4Q00888 419 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 AWAT1Q58HT5 328 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 THEM4Q5T1C6 240 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 SLC25A47Q6Q0C1 308 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 ZER1Q7Z7L7 766 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 NKAIN4Q8IVV8 208 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 ZDHHC22Q8N966 263 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 PFN4Q8NHR9 129 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 ST7LQ8TDW4 575 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 TMEM255BQ8WV15 326 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 TMEM239Q8WW34 195 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 DVL3Q92997 716 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-221ENST00000550914 SH3GL1Q99961 368 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 ALG12Q9BV10 488 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 OR2J1Q9GZK6 312 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 ELOVL3Q9HB03 270 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 ESM1Q9NQ30 184 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 C20orf141Q9NUB4 165 aa10.89□□□□□ -0.67
PTCH1-221ENST00000550914 POLR3KQ9Y2Y1 108 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-221ENST00000550914 TUBG1P23258 451 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 TAS2R41P59536 307 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 PPP1CBP62140 327 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 UBA52P62987 128 aaKnown RBP10.88□□□□□ -0.67
PTCH1-221ENST00000550914 CD47Q08722 323 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 FOXL1Q12952 345 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 SGCAQ16586 387 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 TMEM255AQ5JRV8 349 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 SPATA46Q5T0L3 261 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 FAM205BPQ63HN1 556 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 ARL9Q6T311 187 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 FOXL2NBQ6ZUU3 175 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 SYT9Q86SS6 491 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 AKR7LQ8NHP1 331 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 MOSPD2Q8NHP6 518 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 SLC25A40Q8TBP6 338 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 DYDC1Q8WWB3 177 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 HDAC2Q92769 488 aaKnown RBP10.88□□□□□ -0.67
PTCH1-221ENST00000550914 POP5Q969H6 163 aaKnown RBP10.88□□□□□ -0.67
PTCH1-221ENST00000550914 RBP7Q96R05 134 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 WACQ9BTA9 647 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 ZNF747Q9BV97 191 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 OR2H1Q9GZK4 316 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 WNT5BQ9H1J7 359 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 ZMAT3Q9HA38 289 aaKnown RBP10.88□□□□□ -0.67
PTCH1-221ENST00000550914 TUBG2Q9NRH3 451 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 DDX28Q9NUL7 540 aaKnown RBP10.88□□□□□ -0.67
PTCH1-221ENST00000550914 RIMS3Q9UJD0 308 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 HIF3AQ9Y2N7 669 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 SH3GLB1Q9Y371 365 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 MED31Q9Y3C7 131 aa10.88□□□□□ -0.67
PTCH1-221ENST00000550914 TIMM10BQ9Y5J6 103 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms