RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 DCTN6O00399 190 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 BHLHE40O14503 412 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 TP53P04637 393 aaPredicted RBP11.91□□□□□ -0.5
TROAP-213ENST00000550709 SERPINA5P05154 406 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 DANCRP0C864 163 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 CCL2P13500 99 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 ZNF32P17041 273 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 ACTR3P61158 418 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 PLP2Q04941 152 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 COX10Q12887 443 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 NRN1LQ496H8 165 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 PABPC1L2AQ5JQF8 200 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 FAM27BQ5VT28 67 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 KRT80Q6KB66 452 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 SHQ1Q6PI26 577 aaKnown RBP11.91□□□□□ -0.5
TROAP-213ENST00000550709 CD300LDQ6UXZ3 194 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 FOXL2NBQ6ZUU3 175 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 ZNF584Q8IVC4 421 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 GLB1L2Q8IW92 636 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 OR6V1Q8N148 313 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 FBXL14Q8N1E6 418 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 OR2T33Q8NG76 320 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 OR4Q3Q8NH05 313 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 TEX47Q8TBZ9 253 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 MBD6Q96DN6 1003 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 PERPQ96FX8 193 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 ZNF75AQ96N20 296 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 ZNF416Q9BWM5 594 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 SEMA6AQ9H2E6 1030 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 FAIMQ9NVQ4 179 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 BEX4Q9NWD9 120 aaPredicted RBP11.91□□□□□ -0.5
TROAP-213ENST00000550709 KIF17Q9P2E2 1029 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 REV1Q9UBZ9 1251 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 MYO9AB2RTY4 2548 aa11.91□□□□□ -0.5
TROAP-213ENST00000550709 IQCMA0A1B0GVH7 501 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 ANKRD17O75179 2603 aaKnown RBP11.9□□□□□ -0.5
TROAP-213ENST00000550709 CD8AP01732 235 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 CST2P09228 141 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 MMP7P09237 267 aaPredicted RBP11.9□□□□□ -0.5
TROAP-213ENST00000550709 ANXA8P13928 327 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 APEX1P27695 318 aaKnown RBP11.9□□□□□ -0.5
TROAP-213ENST00000550709 CRABP1P29762 137 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 TTKP33981 857 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 ENDOGQ14249 297 aaKnown RBP11.9□□□□□ -0.5
TROAP-213ENST00000550709 AGAP6Q5VW22 663 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 DNM1P34Q6PK57 102 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 MUC15Q8N387 334 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 LNX2Q8N448 690 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 NPEPL1Q8NDH3 523 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 SLC30A7Q8NEW0 376 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 IL17RDQ8NFM7 739 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 OR4F15Q8NGB8 312 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 OR5K1Q8NHB7 308 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 NRBF2Q96F24 287 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 DUS3LQ96G46 650 aaKnown RBP11.9□□□□□ -0.5
TROAP-213ENST00000550709 RAB3IPQ96QF0 476 aaPredicted RBP11.9□□□□□ -0.5
TROAP-213ENST00000550709 FOXC2Q99958 501 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 BDH2Q9BUT1 245 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 OR51B6Q9H340 312 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 CXorf56Q9H5V9 222 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 CA10Q9NS85 328 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 FBXL3Q9UKT7 428 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 B9D1Q9UPM9 204 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 POLR1DQ9Y2S0 133 aa11.9□□□□□ -0.5
TROAP-213ENST00000550709 USF3Q68DE3 2245 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 IGLV1-36A0A0B4J1U3 117 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 RIIAD1A6NNX1 92 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 C12orf71A8MTZ7 269 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 G3V2T6 193 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 MGRN1O60291 552 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 FCGR1AP12314 374 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 ZNF35P13682 527 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 ZNF23P17027 643 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 CCNOP22674 350 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 APOBEC3AP31941 199 aaPredicted RBP11.89□□□□□ -0.51
TROAP-213ENST00000550709 PYCR1P32322 319 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 THBS4P35443 961 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 CDKN1AP38936 164 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 PCBD1P61457 104 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 PSG4Q00888 419 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 GALK2Q01415 458 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 SNTB2Q13425 540 aaKnown RBP11.89□□□□□ -0.51
TROAP-213ENST00000550709 DAG1Q14118 895 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 MEP1BQ16820 701 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 ZNF774Q6NX45 483 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 ZNF544Q6NX49 715 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 PAQR4Q8N4S7 273 aaPredicted RBP11.89□□□□□ -0.51
TROAP-213ENST00000550709 SLC37A3Q8NCC5 494 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 CPEB3Q8NE35 698 aaKnown RBP11.89□□□□□ -0.51
TROAP-213ENST00000550709 OR9Q1Q8NGQ5 310 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 C11orf40Q8WZ69 217 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 TRAF4Q9BUZ4 470 aaPredicted RBP11.89□□□□□ -0.51
TROAP-213ENST00000550709 OR2H1Q9GZK4 316 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 WNT5BQ9H1J7 359 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 CDH20Q9HBT6 801 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 BAIAP2Q9UQB8 552 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 SPEF1Q9Y4P9 236 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 TIMM10BQ9Y5J6 103 aa11.89□□□□□ -0.51
TROAP-213ENST00000550709 PRRC2AP48634 2157 aaKnown RBP11.89□□□□□ -0.51
TROAP-213ENST00000550709 PTHP01270 115 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms