RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 SLC16A14Q7RTX9 510 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 FAM220AQ7Z4H9 259 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 LHFPL3Q86UP9 236 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 CDC20BQ86Y33 519 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 TMEM252Q8N6L7 170 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 BBS1Q8NFJ9 593 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 VN1R2Q8NFZ6 395 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 OR2AP1Q8NGE2 309 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 RHOXF1Q8NHV9 184 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 ZNF564Q8TBZ8 553 aaPredicted RBP3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 GPX8Q8TED1 209 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 C7orf33Q8WU49 177 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 SGK3Q96BR1 496 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 PRRC1Q96M27 445 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 TMEM246Q9BRR3 403 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 UBXN6Q9BZV1 441 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 ACTR6Q9GZN1 396 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 MRPL47Q9HD33 250 aaKnown RBP3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 MYOZ2Q9NPC6 264 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 ADAP2Q9NPF8 381 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 KCNIP1Q9NZI2 227 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 CLN8Q9UBY8 286 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 PACSIN2Q9UNF0 486 aaPredicted RBP3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 ARAP2Q8WZ64 1704 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 SPEF2Q9C093 1822 aa3.77□□□□□ -1.81
RAB3IP-213ENST00000550647 LRRIQ3A6PVS8 624 aaPredicted RBP3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 FAM25EA8MYX2 175 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 BOLA2-SMG1P6H3BVE0 249 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 PLEKP08567 350 aaPredicted RBP3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 GSTM3P21266 225 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 SLC1A1P43005 524 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 RFX3P48380 749 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 SLC11A1P49279 550 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 TMED10P49755 219 aaKnown RBP3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 CLDN18P56856 261 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 KRTAP10-9P60411 292 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 DOC2AQ14183 400 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 GPNMBQ14956 572 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 ATP6AP1Q15904 470 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 PGGHGQ32M88 737 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 NKAIN1Q4KMZ8 207 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 FKBP1CQ5VVH2 108 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 Q6ZN92 141 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 USP50Q70EL3 339 aaPredicted RBP3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 ASCL5Q7RTU5 278 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 OR10H4Q8NGA5 316 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 SDR42E1Q8WUS8 393 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 CCDC126Q96EE4 140 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 ZBED3Q96IU2 234 aaPredicted RBP3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 GSDMAQ96QA5 445 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 EBF4Q9BQW3 602 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 NICN1Q9BSH3 213 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 CLSTN2Q9H4D0 955 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 CWH43Q9H720 699 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 NTN4Q9HB63 628 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 LYRM4Q9HD34 91 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 FGF20Q9NP95 211 aaPredicted RBP3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 ZNF275Q9NSD4 429 aaPredicted RBP3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 MRPL22Q9NWU5 206 aaKnown RBP3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 CD274Q9NZQ7 290 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 ZNF107Q9UII5 783 aaPredicted RBP3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 MMP17Q9ULZ9 603 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 ASF1AQ9Y294 204 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 THSD7BQ9C0I4 1608 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 CHD4Q14839 1912 aa3.76□□□□□ -1.81
RAB3IP-213ENST00000550647 BRCA1P38398 1863 aaKnown RBP3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 FER1L6Q2WGJ9 1857 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 ARFGEF1Q9Y6D6 1849 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 FAM168BA1KXE4 195 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 C12orf77C9JDV5 145 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 AIM2O14862 343 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 AGPAT2O15120 278 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 EIF3HO15372 352 aaKnown RBP eCLIP3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 OTCP00480 354 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 TIMP1P01033 207 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 HSPB1P04792 205 aaKnown RBP3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 MYL2P10916 166 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 ATP6V1B2P21281 511 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 CPN2P22792 545 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 CX3CR1P49238 355 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 SELENOTP62341 195 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 CSNK1G2P78368 415 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 IRX3P78415 501 aaPredicted RBP3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 SELENBP1Q13228 472 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 ILKQ13418 452 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 BEX5Q5H9J7 111 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 AGBL2Q5U5Z8 902 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 PLCXD3Q63HM9 321 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 ZNF836Q6ZNA1 936 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 ZNF571Q7Z3V5 609 aaPredicted RBP3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 PEX26Q7Z412 305 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 MMAAQ8IVH4 418 aaKnown RBP3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 ZNF321PQ8N8H1 164 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 C8orf31Q8N9H6 132 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 ZNF485Q8NCK3 441 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 DTX3LQ8TDB6 740 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 FAM151AQ8WW52 585 aa3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 DCPSQ96C86 337 aaKnown RBP3.75□□□□□ -1.81
RAB3IP-213ENST00000550647 PELOQ9BRX2 385 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms