RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 FAM71CQ8NEG0 241 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 SPATA4Q8NEY3 305 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 OR4F15Q8NGB8 312 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 OR1K1Q8NGR3 316 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 FBXO30Q8TB52 745 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 PIGXQ8TBF5 258 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 CDS1Q92903 461 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 TMEM45BQ96B21 275 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 L3HYPDHQ96EM0 354 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 OTUB1Q96FW1 271 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-206ENST00000550611 MS4A4EQ96PG1 132 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 ZNF317Q96PQ6 595 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-206ENST00000550611 FUZQ9BT04 418 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 TM2D2Q9BX73 214 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 NMUR2Q9GZQ4 415 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 IQCGQ9H095 443 aaKnown RBP3.01□□□□□ -1.93
LIMA1-206ENST00000550611 CDC42EP4Q9H3Q1 356 aaKnown RBP3.01□□□□□ -1.93
LIMA1-206ENST00000550611 REEP4Q9H6H4 257 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 CTPS2Q9NRF8 586 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 PCDHB16Q9NRJ7 776 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 SERINC1Q9NRX5 453 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 ZDHHC18Q9NUE0 388 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 NINJ2Q9NZG7 142 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 PDP1Q9P0J1 537 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-206ENST00000550611 TMEM216Q9P0N5 145 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 OPN4Q9UHM6 478 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 ATP6V1HQ9UI12 483 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 STK38LQ9Y2H1 464 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 GRIP1Q9Y3R0 1128 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 POLR3HQ9Y535 204 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-206ENST00000550611 SAR1BQ9Y6B6 198 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 ARFGEF3Q5TH69 2177 aa3.01□□□□□ -1.93
LIMA1-206ENST00000550611 LOC105371242A0A075B767 164 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 IGHV2OR16-5A0A0B4J2B6 119 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 TRIM49D1C9J1S8 452 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 G3V4G9 280 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 RPL36A-HNRNPH2H7BZ11 118 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 hCG_2039718K7EN88 272 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 NR5A2O00482 541 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 ANKRD28O15084 1053 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 ZNF208O43345 1280 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 PLPP2O43688 288 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 FCMRO60667 390 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 EIF1BO60739 113 aaKnown RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 RP2O75695 350 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 UGT2B17O75795 530 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 LGI1O95970 557 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 PNPP00491 289 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 HLA-DQA2P01906 255 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 CRYAAP02489 173 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 ADRA2AP08913 450 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 UBL4AP11441 157 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 CBR1P16152 277 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 DDX5P17844 614 aaKnown RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 ADRA2CP18825 462 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 SDC1P18827 310 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 TAC1P20366 129 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 NPR2P20594 1047 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 ATP6V1C1P21283 382 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 ACHEP22303 614 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 GCAP28676 217 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 MAGEA8P43361 318 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 GPR6P46095 362 aaPredicted RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 CCT3P49368 545 aaKnown RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 SERPINB9P50453 376 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 P2RY4P51582 365 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 OR2B6P58173 313 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 UFM1P61960 85 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 EFNB1P98172 346 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 MYBPC1Q00872 1141 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 DCTN2Q13561 401 aaKnown RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 TBCEQ15813 527 aaPredicted RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 UAP1Q16222 522 aaPredicted RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 MAPK14Q16539 360 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 RFTN2Q52LD8 501 aaPredicted RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 PDZK1Q5T2W1 519 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 LCE1FQ5T754 118 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 ACSM5Q6NUN0 579 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 FAHD2BQ6P2I3 314 aaPredicted RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 EMBQ6PCB8 327 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 PAQR6Q6TCH4 344 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 CASP12Q6UXS9 341 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 RNF165Q6ZSG1 346 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 RRM2BQ7LG56 351 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 MYPOPQ86VE0 399 aaPredicted RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 CDK20Q8IZL9 346 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 RIBC1Q8N443 379 aaPredicted RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 PAQR4Q8N4S7 273 aaPredicted RBP3□□□□□ -1.93
LIMA1-206ENST00000550611 TEX29Q8N6K0 151 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 POMGNT2Q8NAT1 580 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 OR52N4Q8NGI2 321 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 OR2T11Q8NH01 316 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 OR51F2Q8NH61 342 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 CDC26Q8NHZ8 85 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 DCAKDQ8WVC6 231 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 CKAP2Q8WWK9 683 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 OIT3Q8WWZ8 545 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 RAB40AQ8WXH6 277 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 TMEM234Q8WY98 164 aa3□□□□□ -1.93
LIMA1-206ENST00000550611 OR5P2Q8WZ92 322 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms