RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ZMAT1Q5H9K5 638 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 CGB2Q6NT52 195 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 ZNF730Q6ZMV8 503 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 TMPRSS11FQ6ZWK6 438 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 MBOAT2Q6ZWT7 520 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 CBLL1Q75N03 491 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 ZER1Q7Z7L7 766 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 PHC2Q8IXK0 858 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 NRMQ8IXM6 262 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 RFLNBQ8N5W9 214 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 OR1J1Q8NGS3 322 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 OR51F2Q8NH61 342 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 NSMAFQ92636 917 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 CMTM5Q96DZ9 223 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 RACGAP1Q9H0H5 632 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 ELOVL3Q9HB03 270 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 KRCC1Q9NPI7 259 aaPredicted RBP9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 ZNF275Q9NSD4 429 aaPredicted RBP9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 ARMCX1Q9P291 453 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 MYEF2Q9P2K5 600 aaKnown RBP9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 RPS6KA6Q9UK32 745 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 NDRG4Q9ULP0 352 aaKnown RBP9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 FZR1Q9UM11 496 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 TMEM5Q9Y2B1 443 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 GRIP1Q9Y3R0 1128 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 FAM32AQ9Y421 112 aaKnown RBP9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 UGT2A1Q9Y4X1 527 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 FBN1P35555 2871 aaKnown RBP9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 C5orf49A4QMS7 147 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 LYNX1G3V0Z9 82 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 XKRYO14609 159 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 TPD52L2O43399 206 aaKnown RBP9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 ICMTO60725 284 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 ZNF682O95780 498 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 LYNX1P0DP58 116 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 MSR1P21757 451 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 CDAP32320 146 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 RPL4P36578 427 aaKnown RBP9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 MDH1P40925 334 aaKnown RBP9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 PSG4Q00888 419 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 SLC3A1Q07837 685 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 TOP3AQ13472 1001 aaPredicted RBP9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 TRIP10Q15642 601 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 HFEQ30201 348 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 ZBED5Q49AG3 693 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 MBNL2Q5VZF2 373 aaKnown RBP9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 PAQR4Q8N4S7 273 aaPredicted RBP9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 POU5F2Q8N7G0 328 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 LRRC75AQ8NAA5 344 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 ICA1LQ8NDH6 482 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 OR51A7Q8NH64 312 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 CLDND2Q8NHS1 167 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 RAB1CQ92928 201 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 FAM162AQ96A26 154 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 NABP1Q96AH0 204 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 TMEM186Q96B77 213 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 TIMD4Q96H15 378 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 POM121L2Q96KW2 1035 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 COG8Q96MW5 612 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 DIRC2Q96SL1 478 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 SOX7Q9BT81 388 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 OR2H1Q9GZK4 316 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 EGLN1Q9GZT9 426 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 GRHPRQ9UBQ7 328 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 ZDHHC8Q9ULC8 765 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 MXRA5Q9NR99 2828 aa9.3□□□□□ -0.92
VTI1BP3-201ENST00000550220 MALRD1Q5VYJ5 2156 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 A0A0A6YYJ9 748 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 IGHV1-69-2A0A0G2JMI3 117 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 A0A1W2PRQ8 180 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 FFAR1O14842 300 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 TCF21O43680 179 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 RP2O75695 350 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 CLPTM1O96005 669 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 MSMBP08118 114 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 CD14P08571 375 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 COX5BP10606 129 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 MAKP20794 623 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 LAP3P28838 519 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 IL2RGP31785 369 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 YAP1P46937 504 aaKnown RBP9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 ZNF81P51508 661 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 SLC7A2P52569 658 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 CCL8P80075 99 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 SCRN3Q0VDG4 424 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 SF3A3Q12874 501 aaKnown RBP eCLIP9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 CCNIQ14094 377 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 DGCR6Q14129 220 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 GPR139Q6DWJ6 353 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 FOXL2NBQ6ZUU3 175 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 VTCN1Q7Z7D3 282 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 YIPF5Q969M3 257 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 RAB39BQ96DA2 213 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 ELMOD3Q96FG2 381 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 MARS2Q96GW9 593 aaKnown RBP9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 HSH2DQ96JZ2 352 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 KCTD14Q9BQ13 255 aaPredicted RBP9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 OR51B6Q9H340 312 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 SAP30LQ9HAJ7 183 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms