RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 APLNRP35414 380 aa14.86□□□□□ -0.03
CHMP1A-208ENST00000550102 GLRXP35754 106 aa14.86□□□□□ -0.03
CHMP1A-208ENST00000550102 RPS6KA3P51812 740 aa14.86□□□□□ -0.03
CHMP1A-208ENST00000550102 PABPC1L2AQ5JQF8 200 aa14.86□□□□□ -0.03
CHMP1A-208ENST00000550102 FAM27BQ5VT28 67 aa14.86□□□□□ -0.03
CHMP1A-208ENST00000550102 ZER1Q7Z7L7 766 aa14.86□□□□□ -0.03
CHMP1A-208ENST00000550102 MRPL24Q96A35 216 aaKnown RBP14.86□□□□□ -0.03
CHMP1A-208ENST00000550102 LRGUKQ96M69 825 aa14.86□□□□□ -0.03
CHMP1A-208ENST00000550102 GPA33Q99795 319 aa14.86□□□□□ -0.03
CHMP1A-208ENST00000550102 TRIM15Q9C019 465 aa14.86□□□□□ -0.03
CHMP1A-208ENST00000550102 ABCA1O95477 2261 aa14.86□□□□□ -0.03
CHMP1A-208ENST00000550102 IGHV4-30-2A0A087WSY4 118 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 C12orf71A8MTZ7 269 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 LY6HO94772 140 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 UBOX5O94941 541 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 LY6G6DO95868 133 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 F12P00748 615 aaPredicted RBP14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 CST2P09228 141 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 APEHP13798 732 aaKnown RBP14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 LAP3P28838 519 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 SLC6A6P31641 620 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 PCBD1P61457 104 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 DNAL1Q4LDG9 190 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 FAM98BQ52LJ0 330 aaKnown RBP14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 Q71RC1 249 aaPredicted RBP14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 PAQR4Q8N4S7 273 aaPredicted RBP14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 FAM168AQ92567 244 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 MRPL37Q9BZE1 423 aaKnown RBP14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 RAB1BQ9H0U4 201 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 POLE4Q9NR33 117 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 IER3IP1Q9Y5U9 82 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 LYVE1Q9Y5Y7 322 aa14.85□□□□□ -0.03
CHMP1A-208ENST00000550102 FN1P02751 2386 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 PPP1R3DO95685 299 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 TXNDC12O95881 172 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 CCL2P13500 99 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 SLC25A16P16260 332 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 CTLA4P16410 223 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 APEX1P27695 318 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 GSSP48637 474 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 EVX1P49640 407 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 MS4A2Q01362 244 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 PGBD2Q6P3X8 592 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 ZNF620Q6ZNG0 422 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 LINC00471Q8N535 108 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 OR10H5Q8NGA6 315 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 GNPDA2Q8TDQ7 276 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 CLPTM1LQ96KA5 538 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 ERMAPQ96PL5 475 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 DOK1Q99704 481 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 SYT3Q9BQG1 590 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 THTPAQ9BU02 230 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 OR2H1Q9GZK4 316 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 SYT4Q9H2B2 425 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 OR52D1Q9H346 318 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 MYOZ1Q9NP98 299 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 VSX1Q9NZR4 365 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 ZFHX3Q15911 3703 aa14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 YLPM1P49750 1951 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-208ENST00000550102 TMEM129A0AVI4 362 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 M0R233 179 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 TNFRSF11BO00300 401 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 GYG2O15488 501 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 SYNGR3O43761 229 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 FAM157BP0CG42 384 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 STOMP27105 288 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 PCSK6P29122 969 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 HMGA2P52926 109 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 TSPAN31Q12999 210 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 ENDOGQ14249 297 aaKnown RBP14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 MSMPQ1L6U9 139 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 RGS7BPQ6MZT1 257 aaPredicted RBP14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 C1orf94Q6P1W5 598 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 DNM1P34Q6PK57 102 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 PTCHD4Q6ZW05 846 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 MAPK1IP1LQ8NDC0 245 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 CPEB3Q8NE35 698 aaKnown RBP14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 AKR7LQ8NHP1 331 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 C10orf105Q8TEF2 133 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 WACQ9BTA9 647 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 IFT27Q9BW83 186 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 ZNF416Q9BWM5 594 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 BCL2L14Q9BZR8 327 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 OR51B6Q9H340 312 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 RERGLQ9H628 205 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 EMC7Q9NPA0 242 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 FZR1Q9UM11 496 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 TIMM10BQ9Y5J6 103 aa14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 SONP18583 2426 aaKnown RBP14.83□□□□□ -0.04
CHMP1A-208ENST00000550102 A0A1W2PPW3 197 aa14.82□□□□□ -0.04
CHMP1A-208ENST00000550102 IMPA2O14732 288 aa14.82□□□□□ -0.04
CHMP1A-208ENST00000550102 ARPC3O15145 178 aa14.82□□□□□ -0.04
CHMP1A-208ENST00000550102 SLC16A7O60669 478 aa14.82□□□□□ -0.04
CHMP1A-208ENST00000550102 KHDRBS3O75525 346 aaKnown RBP14.82□□□□□ -0.04
CHMP1A-208ENST00000550102 RAD52P43351 418 aa14.82□□□□□ -0.04
CHMP1A-208ENST00000550102 GDI2P50395 445 aaKnown RBP14.82□□□□□ -0.04
CHMP1A-208ENST00000550102 PDLIM4P50479 330 aa14.82□□□□□ -0.04
CHMP1A-208ENST00000550102 PSG4Q00888 419 aa14.82□□□□□ -0.04
CHMP1A-208ENST00000550102 TRAP1Q12931 704 aaKnown RBP14.82□□□□□ -0.04
CHMP1A-208ENST00000550102 RFX4Q33E94 735 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms