RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ZNF454Q8N9F8 522 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 NUDT9Q9BW91 350 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 RBM24Q9BX46 236 aaKnown RBP12.84□□□□□ -0.35
CACNB3-209ENST00000548860 PPP4R1LQ9P1A2 415 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 CACNA1DQ01668 2161 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 LINC00271P0C7V0 271 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 ENPP1P22413 925 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 AVPR2P30518 371 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 SDHAP31040 664 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 EIF2B5Q13144 721 aaKnown RBP12.84□□□□□ -0.35
CACNB3-209ENST00000548860 FZD2Q14332 565 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 SLC36A2Q495M3 483 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 SLC16A9Q7RTY1 509 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 C12orf45Q8N5I9 185 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-209ENST00000548860 GALNT6Q8NCL4 622 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 SLC41A2Q96JW4 573 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 UPB1Q9UBR1 384 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 TMEM184BQ9Y519 407 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-209ENST00000548860 PHF3Q92576 2039 aaKnown RBP12.83□□□□□ -0.35
CACNB3-209ENST00000548860 GBF1Q92538 1859 aa12.83□□□□□ -0.35
CACNB3-209ENST00000548860 FAM221BA6H8Z2 402 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 LEUTXA8MZ59 168 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 TGFBR3LH3BV60 316 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 TRAPPC6AO75865 159 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 HTR2CP28335 458 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 RPL35P42766 123 aaKnown RBP12.83□□□□□ -0.36
CACNB3-209ENST00000548860 ZNF74Q16587 644 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 KIAA0895LQ68EN5 471 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 LAMTOR1Q6IAA8 161 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 OR14A16Q8NHC5 309 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 NT5CQ8TCD5 201 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 PAQR8Q8TEZ7 354 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 CCDC107Q8WV48 283 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 TOMM40LQ969M1 308 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 ST6GALNAC2Q9UJ37 374 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 NUP50Q9UKX7 468 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 PCDHGA5Q9Y5G8 931 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 RLN2P04090 185 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 CTLA4P16410 223 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 BAIAP2L2Q6UXY1 529 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 ELSPBP1Q96BH3 223 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 LMF2Q9BU23 707 aaKnown RBP12.83□□□□□ -0.36
CACNB3-209ENST00000548860 MMP25Q9NPA2 562 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 PARPBPQ9NWS1 579 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 FRMPD3Q5JV73 1810 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 A0A0B4J2A0 478 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 EFCAB7A8K855 629 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 ALOX12BO75342 701 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 IL11P20809 199 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 CD200R1LQ6Q8B3 271 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 TRAPPC6BQ86SZ2 158 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 TMEM17Q86X19 198 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 DND1Q8IYX4 353 aaKnown RBP12.83□□□□□ -0.36
CACNB3-209ENST00000548860 ST8SIA2Q92186 375 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 SDHAF3Q9NRP4 125 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 SHPKQ9UHJ6 478 aa12.83□□□□□ -0.36
CACNB3-209ENST00000548860 A0A087WV62 115 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-209ENST00000548860 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-209ENST00000548860 LMX1BO60663 402 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 NPY4RP50391 375 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 MMP15P51511 669 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 ZNF41P51814 821 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-209ENST00000548860 ZNF117Q03924 483 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 RBMS2Q15434 407 aaKnown RBP12.82□□□□□ -0.36
CACNB3-209ENST00000548860 PWWP2BQ6NUJ5 590 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 GSG1LQ6UXU4 331 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 RBPMSQ93062 196 aaKnown RBP12.82□□□□□ -0.36
CACNB3-209ENST00000548860 TSPAN32Q96QS1 320 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 NTMQ9P121 344 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 ZNF230Q9UIE0 474 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-209ENST00000548860 HHLA2Q9UM44 414 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 SPTY2D1-AS1A0A0U1RR47 76 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 PRR32B1ATL7 298 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 PTP4A3O75365 173 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 DLSTP36957 453 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 SERTAD2Q14140 314 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 MUC20Q8N307 709 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-209ENST00000548860 TMEM156Q8N614 296 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 ZBTB8AQ96BR9 441 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 ARL5BQ96KC2 179 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 VSTM2LQ96N03 204 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 ALKBH4Q9NXW9 302 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 CHRNA9Q9UGM1 479 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 GMEB2Q9UKD1 530 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 IGHV3-15A0A0B4J1V0 119 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 TRBV11-1A0A0K0K1C0 115 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 SRPX2O60687 465 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-209ENST00000548860 FBXO24O75426 580 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 FXYD4P59646 89 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 NR0B2Q15466 257 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 INPP5JQ15735 1006 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-209ENST00000548860 TMEM176BQ3YBM2 270 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-209ENST00000548860 RAET1LQ5VY80 246 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 TMEM88Q6PEY1 159 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 TCTN2Q96GX1 697 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-209ENST00000548860 SDHAF2Q9NX18 166 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 STEAP1Q9UHE8 339 aa12.82□□□□□ -0.36
CACNB3-209ENST00000548860 ESPL1Q14674 2120 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms