RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 U3KQK5 164 aa3.4□□□□□ -1.87
SNHG1-220ENST00000544550 WNK1Q9H4A3 2382 aa3.4□□□□□ -1.87
SNHG1-220ENST00000544550 CMYA5Q8N3K9 4069 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF816-ZNF321PA0A0X1KG74 233 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 KIR2DS1A0A191URI9 304 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 TMEM72A0PK05 275 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 LIPT2A6NK58 231 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 RNASEK-C17orf49H0YIS7 233 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 H3BQF6 201 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 P2RY10O00398 339 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 FAAHO00519 579 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 TM9SF1O15321 606 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 SPRY3O43610 288 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 MGRN1O60291 552 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 SCN2BO60939 215 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 STX11O75558 287 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 UGT2B17O75795 530 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 SEC31AO94979 1220 aaKnown RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 DUS4LO95620 317 aaKnown RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 IGHV1-46P01743 117 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 IGHV3-13P01766 116 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 HLA-HP01893 362 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 LCKP06239 509 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 CHRM4P08173 479 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 GUSBP08236 651 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ADH4P08319 380 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 OR8G3PP0DMU2 310 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 TNFRSF1AP19438 455 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 MAKP20794 623 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 GTF2E2P29084 291 aaKnown RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 SSTR1P30872 391 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 RYKP34925 604 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 HSD17B3P37058 310 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ANP32AP39687 249 aaKnown RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 MDH2P40926 338 aaKnown RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 IER3P46695 156 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 CCT5P48643 541 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 IDH2P48735 452 aaKnown RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 SERPINB8P50452 374 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 CDH13P55290 713 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 PKNOX1P55347 436 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 CLDN17P56750 224 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 BTG1P62324 171 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 GNB2P62879 340 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 BLOC1S1P78537 153 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 GUCY2DQ02846 1103 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 RBBP4Q09028 425 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 FASTKD3Q14CZ7 662 aaKnown RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 GPR68Q15743 365 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 GSTA3Q16772 222 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 TBC1D28Q2M2D7 210 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 CLEC6AQ6EIG7 209 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 EMBQ6PCB8 327 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF813Q6ZN06 617 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 C3orf62Q6ZUJ4 267 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 GPRIN3Q6ZVF9 776 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 MEPCEQ7L2J0 689 aaKnown RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF627Q7L945 461 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 DPPA2Q7Z7J5 298 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 LRRC28Q86X40 367 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 RNF130Q86XS8 419 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 TMEM139Q8IV31 216 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 LRRC8AQ8IWT6 810 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 NATD1Q8N6N6 113 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 OR1J2Q8NGS2 313 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 KIF18AQ8NI77 898 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 VANGL1Q8TAA9 524 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 MUC7Q8TAX7 377 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ACTRT1Q8TDG2 376 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 CIDECQ96AQ7 238 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 MTERF3Q96E29 417 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 MS4A14Q96JA4 679 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 MAGEB18Q96M61 343 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF75AQ96N20 296 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 GPR78Q96P69 363 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 SDF2Q99470 211 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 MLST8Q9BVC4 326 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ALG8Q9BVK2 526 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 GPR61Q9BZJ8 451 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 LRMDAQ9H2I8 198 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 REEP4Q9H6H4 257 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 CDH20Q9HBT6 801 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 TRIM36Q9NQ86 728 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 RRAGDQ9NQL2 400 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 POLE3Q9NRF9 147 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 TMEM106BQ9NUM4 274 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ACOXLQ9NUZ1 547 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 EXD2Q9NVH0 621 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ADPRHL2Q9NX46 363 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 MIOXQ9UGB7 285 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 TBK1Q9UHD2 729 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 OSGIN1Q9UJX0 560 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF225Q9UK10 706 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 POFUT2Q9Y2G5 429 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 CAB39Q9Y376 341 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 POLR3HQ9Y535 204 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 SOX21Q9Y651 276 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-220ENST00000544550 USH1CQ9Y6N9 552 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 ARFGEF3Q5TH69 2177 aa3.39□□□□□ -1.87
SNHG1-220ENST00000544550 CADP27708 2225 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms