RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 GGT2P36268 569 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PTDSS1P48651 473 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 RPS7P62081 194 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 GSG1Q2KHT4 349 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 KLHL12Q53G59 568 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 C1QTNF12Q5T7M4 302 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FAM27BQ5VT28 67 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TMEM163Q8TC26 289 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CYGBQ8WWM9 190 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PTP4A1Q93096 173 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 HCAR1Q9BXC0 346 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 NMNAT2Q9BZQ4 307 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 H2AFY2Q9P0M6 372 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 POLR1DQ9Y2S0 133 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ZNF503-AS2A6NEH8 195 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 DLGAP1O14490 977 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 RAB36O95755 333 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SCG5P05408 212 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PATE4P0C8F1 98 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CRYGSP22914 178 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZNF83P51522 516 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 HSF2Q03933 536 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 OTPQ5XKR4 325 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 TMEM53Q6P2H8 277 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MDP1Q86V88 176 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SLC26A10Q8NG04 563 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 OR10H5Q8NGA6 315 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 C11orf40Q8WZ69 217 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZNF416Q9BWM5 594 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZNF224Q9NZL3 707 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 KCNN3Q9UGI6 736 aa12.64□□□□□ -0.39
TNFRSF1A-216ENST00000543995 TVP23AA6NH52 213 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 C12orf71A8MTZ7 269 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 M0R1B8 84 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PRODHO43272 600 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CST2P09228 141 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 GAAP10253 952 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZNF823P16415 610 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PAX7P23759 505 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 FMO3P31513 532 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ARR3P36575 388 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 BLVRAP53004 296 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 RAB1AP62820 205 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 TEKQ02763 1124 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MEP1BQ16820 701 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 FBXW10Q5XX13 1052 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 UGT2A3Q6UWM9 527 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 DPPA2Q7Z7J5 298 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 DEPDC4Q8N2C3 294 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 DHRSXQ8N5I4 330 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 BBS1Q8NFJ9 593 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 OR8J1Q8NGP2 316 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 FGFBP3Q8TAT2 258 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZNRF4Q8WWF5 429 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PITX2Q99697 317 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CDADC1Q9BWV3 514 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ESRP2Q9H6T0 727 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MOV10Q9HCE1 1003 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 NPAP1Q9NZP6 1156 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 NDRG4Q9ULP0 352 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MOKQ9UQ07 419 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 COL12A1Q99715 3063 aa12.63□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SLC16A6O15403 523 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 GLCEO94923 617 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 TFP02787 698 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CBR1P16152 277 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZNF32P17041 273 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 IDH3GP51553 393 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PCBD1P61457 104 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 LSM6P62312 80 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ADAM8P78325 824 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 EFNB1P98172 346 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 APOFQ13790 326 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 KEAP1Q14145 624 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ENDOGQ14249 297 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 BEX5Q5H9J7 111 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 NXNL2Q5VZ03 156 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 TTC23Q5W5X9 447 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 HIST2H2BCQ6DN03 193 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 TMEM108Q6UXF1 575 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 BCDIN3DQ7Z5W3 292 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZNF511Q8NB15 262 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 UBE2FQ969M7 185 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 FBXO17Q96EF6 278 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PLPPR2Q96GM1 343 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 APOL4Q9BPW4 351 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 B3GNT2Q9NY97 397 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 LRRK2Q5S007 2527 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ADGRG4Q8IZF6 3080 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 E9PQ18 207 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 HRGP04196 525 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 AQP4P55087 323 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PLP2Q04941 152 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 AQP6Q13520 282 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 DAZAP2Q15038 168 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 KCNMB1Q16558 191 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SLC35D3Q5M8T2 416 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 LINC01590Q5TEZ4 76 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 LCN1P1Q5VSP4 162 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms