RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 CROCCP2Q86T23 111 aa16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 TSPYL5Q86VY4 417 aaPredicted RBP16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 RBM45Q8IUH3 476 aaKnown RBP16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 NOXO1Q8NFA2 376 aa16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 OR4D11Q8NGI4 311 aa16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 GEMIN6Q8WXD5 167 aaKnown RBP16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 ASB10Q8WXI3 467 aa16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 CCNB1IP1Q9NPC3 277 aa16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 DCAF16Q9NXF7 216 aa16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 EGFL7Q9UHF1 273 aa16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 INSIG2Q9Y5U4 225 aa16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 USH1CQ9Y6N9 552 aa16.84■□□□□ 0.29
LPCAT3-211ENST00000543794 C5orf49A4QMS7 147 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 TRAPPC13A5PLN9 417 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 F13BP05160 661 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 ACADSP16219 412 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 CDAP32320 146 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 SLC6A9P48067 706 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 GDI2P50395 445 aaKnown RBP16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 UGT2B15P54855 530 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 PRKDCP78527 4128 aaKnown RBP16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 NANOGNBQ7Z5D8 188 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 AKR7LQ8NHP1 331 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 SLC25A28Q96A46 364 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 NABP1Q96AH0 204 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 DCLRE1CQ96SD1 692 aaKnown RBP16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 PATZ1Q9HBE1 687 aaKnown RBP16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 MEPEQ9NQ76 525 aaPredicted RBP16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 CCDC167Q9P0B6 97 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 SLC7A7Q9UM01 511 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 UGT2A1Q9Y4X1 527 aa16.83■□□□□ 0.28
LPCAT3-211ENST00000543794 A0A1W2PRG6 482 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 MCIDASD6RGH6 385 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 H3BSA7 217 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 ICMTO60725 284 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 ERLIN1O75477 346 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 PPP1CBP62140 327 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 PSG4Q00888 419 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 RPL18Q07020 188 aaKnown RBP16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 HNRNPA0Q13151 305 aaKnown RBP16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 SLC9A3R2Q15599 337 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 TMEM155Q4W5P6 130 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 MIDNQ504T8 468 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 DLEU7Q6UYE1 221 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 HDDC2Q7Z4H3 204 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 LRRC28Q86X40 367 aaPredicted RBP16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 PTOV1Q86YD1 416 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 KLHL36Q8N4N3 616 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 SPICQ8N5J4 248 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 C11orf65Q8NCR3 313 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 NMD3Q96D46 503 aaKnown RBP16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 PRSS27Q9BQR3 290 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 PCDHAC1Q9H158 963 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 SMURF2Q9HAU4 748 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 MSL2Q9HCI7 577 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 TMEM106BQ9NUM4 274 aa16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.82■□□□□ 0.28
LPCAT3-211ENST00000543794 A8MXK9 166 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 SLC2A10O95528 541 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 NGFP01138 241 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 OPN1SWP03999 348 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 DAP3P51398 398 aaKnown RBP16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 TNFAIP6P98066 277 aaPredicted RBP16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 PAX8Q06710 450 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 CDK5R2Q13319 367 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 OCLNQ16625 522 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 RUNDC3AQ59EK9 446 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 ZMAT1Q5H9K5 638 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 ARMC4Q5T2S8 1044 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 FAM27BQ5VT28 67 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 RFPL4BQ6ZWI9 263 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 ZNF283Q8N7M2 679 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 ABHD4Q8TB40 342 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 CPPED1Q9BRF8 314 aaPredicted RBP16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 MRI1Q9BV20 369 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 PARD6BQ9BYG5 372 aa16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 STX18Q9P2W9 335 aaKnown RBP16.81■□□□□ 0.28
LPCAT3-211ENST00000543794 IGKV1D-43A0A0B4J1Z2 117 aa16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 FUT1P19526 365 aa16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 SEC61A1P61619 476 aaKnown RBP16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 SGCAQ16586 387 aa16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 MTX3Q5HYI7 312 aa16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 LEG1Q6P5S2 330 aa16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 VANGL1Q8TAA9 524 aaPredicted RBP16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 TAF15Q92804 592 aaKnown RBP eCLIP16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 SAMD8Q96LT4 415 aa16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 OR2H1Q9GZK4 316 aa16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 MS4A7Q9GZW8 240 aaPredicted RBP16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 INIPQ9NRY2 104 aa16.8■□□□□ 0.28
LPCAT3-211ENST00000543794 A0A0G2JK05 382 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 F5H0A9 414 aaPredicted RBP16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 POLR3GO15318 223 aaPredicted RBP16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 MT-ND1P03886 318 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 TSPAN19P0C672 248 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 CD247P20963 164 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 RBMXP38159 391 aaKnown RBP16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 AQP2P41181 271 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 ERVK-25P63136 954 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 PSG7Q13046 419 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 SLC25A47Q6Q0C1 308 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms