RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 SNAP29O95721 258 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 GPANK1O95872 356 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 PTHP01270 115 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 CRYAAP02489 173 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 ALPLP05186 524 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 CST2P09228 141 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 SPARCP09486 303 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 CBR1P16152 277 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 ZNF32P17041 273 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 SPI1P17947 270 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 PTAFRP25105 342 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 PEX2P28328 305 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 APLNRP35414 380 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 POLR2IP36954 125 aaKnown RBP5.51□□□□□ -1.53
LTBR-212ENST00000543542 ZNF133P52736 654 aaPredicted RBP5.51□□□□□ -1.53
LTBR-212ENST00000543542 BLVRAP53004 296 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 ADAM8P78325 824 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 GALK2Q01415 458 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 TEKQ02763 1124 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 BSPH1Q075Z2 132 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 SCRN3Q0VDG4 424 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 RAB39AQ14964 217 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 DAZAP2Q15038 168 aaPredicted RBP5.51□□□□□ -1.53
LTBR-212ENST00000543542 TBC1D28Q2M2D7 210 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 NRN1LQ496H8 165 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 NCMAPQ5T1S8 102 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 C1QTNF12Q5T7M4 302 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 LCN1P1Q5VSP4 162 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 SLX4IPQ5VYV7 408 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 OTPQ5XKR4 325 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 ADAM5Q6NVV9 412 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 TMEM154Q6P9G4 183 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 C22orf34Q6ZV56 151 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 ERI1Q8IV48 349 aaKnown RBP5.51□□□□□ -1.53
LTBR-212ENST00000543542 CPOQ8IVL8 374 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 OR6V1Q8N148 313 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 OR1J2Q8NGS2 313 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 AKR7LQ8NHP1 331 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 FAM81AQ8TBF8 368 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 CYGBQ8WWM9 190 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 C11orf40Q8WZ69 217 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 NMD3Q96D46 503 aaKnown RBP5.51□□□□□ -1.53
LTBR-212ENST00000543542 IL4I1Q96RQ9 567 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 SLC29A1Q99808 456 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 ZNF416Q9BWM5 594 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 GABARAPL3Q9BY60 117 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 RACGAP1Q9H0H5 632 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 CLEC4MQ9H2X3 399 aaPredicted RBP5.51□□□□□ -1.53
LTBR-212ENST00000543542 VCX3BQ9H321 246 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 UBTD1Q9HAC8 227 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 RNPEPL1Q9HAU8 725 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 CDH20Q9HBT6 801 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 C8orf4Q9NR00 106 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 SMPD3Q9NY59 655 aaPredicted RBP5.51□□□□□ -1.53
LTBR-212ENST00000543542 RRP15Q9Y3B9 282 aaKnown RBP5.51□□□□□ -1.53
LTBR-212ENST00000543542 RNF115Q9Y4L5 304 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 SPEF1Q9Y4P9 236 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 UGT2A1Q9Y4X1 527 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 TIMM10BQ9Y5J6 103 aa5.51□□□□□ -1.53
LTBR-212ENST00000543542 HELZ2Q9BYK8 2649 aaKnown RBP5.5□□□□□ -1.53
LTBR-212ENST00000543542 IGLV1-36A0A0B4J1U3 117 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 IGHV1-18A0A0C4DH31 117 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 LOC100130705A0A1B0GUX0 176 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 ZNF503-AS2A6NEH8 195 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 DPRXA6NFQ7 191 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 VSTM5A8MXK1 200 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 M0R129 80 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 DCTN6O00399 190 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 PRKYO43930 277 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 DOK2O60496 412 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 GLCEO94923 617 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 ATP6V1G2O95670 118 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 HRGP04196 525 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 SCG5P05408 212 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 CELA3BP08861 270 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 CECR9P0C854 216 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 CLUP10909 449 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 CD40P25942 277 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 EPHA2P29317 976 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 GSTT1P30711 240 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 GGT2P36268 569 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 ATP6V1E1P36543 226 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 GDI2P50395 445 aaKnown RBP5.5□□□□□ -1.53
LTBR-212ENST00000543542 SLC25A1P53007 311 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 CDH11P55287 796 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 LSM6P62312 80 aaKnown RBP5.5□□□□□ -1.53
LTBR-212ENST00000543542 DBPQ10586 325 aaPredicted RBP5.5□□□□□ -1.53
LTBR-212ENST00000543542 AQP6Q13520 282 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 APOFQ13790 326 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 TAF13Q15543 124 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 MEP1BQ16820 701 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 PABPC1L2AQ5JQF8 200 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 FAM27BQ5VT28 67 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 C12orf73Q69YU5 71 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 VHLLQ6RSH7 139 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 UGT2A3Q6UWM9 527 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 ZNF704Q6ZNC4 412 aaPredicted RBP5.5□□□□□ -1.53
LTBR-212ENST00000543542 FOXL2NBQ6ZUU3 175 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 ZNF627Q7L945 461 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 ZBTB46Q86UZ6 589 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms