RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ACY1Q03154 408 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 C17orf67Q0P5P2 114 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 PCK2Q16822 640 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ZBTB37Q5TC79 503 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 THOC7Q6I9Y2 204 aaKnown RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 FAM166AQ6J272 317 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 TMEM71Q6P5X7 295 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 GLDNQ6ZMI3 551 aaPredicted RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ANKRD37Q7Z713 158 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 CATSPERDQ86XM0 798 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 APCDD1LQ8NCL9 501 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 NFAM1Q8NET5 270 aaPredicted RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 MFSD8Q8NHS3 518 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 DUSP19Q8WTR2 217 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 TTC9Q92623 222 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 NUDT22Q9BRQ3 303 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 FANCFQ9NPI8 374 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 DLL4Q9NR61 685 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 MTFP1Q9UDX5 166 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ELF5Q9UKW6 265 aaPredicted RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ADAMTS9Q9P2N4 1935 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 LOC100289279A0A1B0GTE1 492 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 GGT3PA6NGU5 568 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SNRPGP15A8MWD9 76 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SRSF10O75494 262 aaKnown RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 CTAG2O75638 210 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ONECUT2O95948 504 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SYPP08247 313 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 CCKBRP32239 447 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 APOBEC1P41238 236 aaKnown RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 VEGFCP49767 419 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ADAM8P78325 824 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SSBP1Q04837 148 aaKnown RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 PUDPQ08623 228 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 C19orf57Q0VDD7 668 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 CAMK2DQ13557 499 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 RAB11BQ15907 218 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ANKRD39Q53RE8 183 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SFRP4Q6FHJ7 346 aaPredicted RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 FIP1L1Q6UN15 594 aaKnown RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SLC35D2Q76EJ3 337 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 GLB1L2Q8IW92 636 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SPICQ8N5J4 248 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ZNF248Q8NDW4 579 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 OR11H4Q8NGC9 324 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 OR8K3Q8NH51 312 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ASB10Q8WXI3 467 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ATOH1Q92858 354 aaPredicted RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 NXPE2Q96DL1 559 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ABHD6Q9BV23 337 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ZNF436Q9C0F3 470 aaPredicted RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 OR11A1Q9GZK7 315 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 B3GNT2Q9NY97 397 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 MRPL15Q9P015 296 aaKnown RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SLC23A1Q9UHI7 598 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ING1Q9UK53 422 aaPredicted RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 MTRF1O75570 445 aaKnown RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 HPXP02790 462 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 CD2P06729 351 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 CSF1P09603 554 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 IGFBP3P17936 291 aaPredicted RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 DCTDP32321 178 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 PER3P56645 1201 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 EIF2B1Q14232 305 aaKnown RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SHBQ15464 509 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 LINC00303Q3SY05 128 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ASPHD2Q6ICH7 369 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 DEGS2Q6QHC5 323 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 KANSL1Q7Z3B3 1105 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 BEST4Q8NFU0 473 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SLC26A10Q8NG04 563 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ASB5Q8WWX0 329 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 DACT3Q96B18 629 aaPredicted RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 CLDN23Q96B33 292 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 MS4A3Q96HJ5 214 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ULBP3Q9BZM4 244 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 NOX3Q9HBY0 568 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 GPN1Q9HCN4 374 aaPredicted RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 FLVCR2Q9UPI3 526 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 DHDHQ9UQ10 334 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 LRP12Q9Y561 859 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 R4GMQ9 66 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 RP1P56715 2156 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 TRIOO75962 3097 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 IGLV3-32A0A0A0MS00 114 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 A0A1W2PNV4 684 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 CIB4A0PJX0 185 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 G3V3Q6 166 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 H0YC42 278 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 MS4A18H0YCH9 400 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 K7ESF4 209 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 ARPC1BO15143 372 aaKnown RBP5.87□□□□□ -1.47
PTPRO-208ENST00000542557 ALOX12BO75342 701 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 RBBP9O75884 186 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 SNAPC5O75971 98 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 AQP8O94778 261 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 PNPP00491 289 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 HRGP04196 525 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 ALDOBP05062 364 aa5.87□□□□□ -1.47
PTPRO-208ENST00000542557 ISG15P05161 165 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms