RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 NPIPB9F8W1W9 429 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 H3BMQ9 156 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 H3BNH8 94 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 H3BTX0 84 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 K7EQM0 130 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 M0QYV0 167 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 COPEO14579 308 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 DLEU1O43261 78 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 PSTPIP1O43586 416 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 GGCTO75223 188 aaKnown RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 UGT2B11O75310 529 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 CRLF1O75462 422 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ECI2O75521 394 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 POP7O75817 140 aaKnown RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 EIF3GO75821 320 aaKnown RBP eCLIP2.67□□□□□ -1.98
USP28-210ENST00000542033 TM7SF2O76062 418 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 STK17BO94768 372 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 SUPT7LO94864 414 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 SNAI1O95863 264 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 IFNA7P01567 189 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 PIGRP01833 764 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 C1QBP02746 253 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 SHBGP04278 402 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 PCCAP05165 728 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 RPLP0P05388 317 aaKnown RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 ANXA4P09525 319 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 SLC35G4P0C7Q5 338 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 METTL15P1P0C7V9 234 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 NR2C1P13056 603 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 AOC1P19801 751 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 GABRR1P24046 479 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 CHI3L1P36222 383 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 NAA10P41227 235 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 CSKP41240 450 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ZFP36L2P47974 494 aaKnown RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 GABRA4P48169 554 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 PRKXP51817 358 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 KRTAP10-5P60370 271 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 BTG1P62324 171 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ERVK-25P63136 954 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 MRPS11P82912 194 aaKnown RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 VLDLRP98155 873 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 IL9RQ01113 521 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 TNFRSF9Q07011 255 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 PDIA2Q13087 525 aaKnown RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 RIGQ13278 110 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 BTN1A1Q13410 526 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 IL18R1Q13478 541 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 SLC17A1Q14916 467 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 LPAL2Q16609 132 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 GUCA2BQ16661 112 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 GUK1Q16774 197 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 EXOC3L4Q17RC7 722 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 PTPN20Q4JDL3 420 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 BCL7AQ4VC05 210 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 C9orf64Q5T6V5 341 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 N4BP2L1Q5TBK1 243 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 MEDAGQ5VYS4 303 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 WSCD1Q658N2 575 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 MED27Q6P2C8 311 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 PAQR6Q6TCH4 344 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 CBLN3Q6UW01 205 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 CYHR1Q6ZMK1 362 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ZNF730Q6ZMV8 503 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 Q71RC1 249 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 EIF3MQ7L2H7 374 aaKnown RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 NDUFAF7Q7L592 441 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 LRRC70Q7Z2Q7 622 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 VTCN1Q7Z7D3 282 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 LHFPL4Q7Z7J7 247 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 CARM1Q86X55 608 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ANGPTL5Q86XS5 388 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ECHDC2Q86YB7 292 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 CBWD2Q8IUF1 395 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ZBTB8OSQ8IWT0 167 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 SKA3Q8IX90 412 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 PRSS58Q8IYP2 241 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 UBQLNLQ8IYU4 475 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 C8orf59Q8N0T1 100 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 LYG1Q8N1E2 194 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 C12orf45Q8N5I9 185 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 CHDHQ8NE62 594 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 OR10G7Q8NGN6 311 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 RPLP0P6Q8NHW5 317 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 AP3S1Q92572 193 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 RBPMSQ93062 196 aaKnown RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 MRGPRFQ96AM1 343 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 SENP8Q96LD8 212 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 CNBD2Q96M20 576 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 C12orf66Q96MD2 445 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 VSTM2LQ96N03 204 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ZNF607Q96SK3 696 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 HBEGFQ99075 208 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 FMO2Q99518 471 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 APOL4Q9BPW4 351 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 DDA1Q9BW61 102 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 PARD6GQ9BYG4 376 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 NXF2Q9GZY0 626 aaKnown RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 MFFQ9GZY8 342 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms