RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RELL2Q8NC24 303 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 ATP6V1C2Q8NEY4 427 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 OR10D3Q8NH80 312 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 ST8SIA1Q92185 356 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 OSTF1Q92882 214 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 CPNE4Q96A23 557 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 DGCR14Q96DF8 476 aaKnown RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 ZHX1-C8orf76Q96EF9 292 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 GMPPAQ96IJ6 420 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 MARK4Q96L34 752 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 THUMPD3Q9BV44 507 aaKnown RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 PLK3Q9H4B4 646 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 RNF122Q9H9V4 155 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 MCCC2Q9HCC0 563 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 EXOSC3Q9NQT5 275 aaKnown RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 MRPL15Q9P015 296 aaKnown RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 CCDC167Q9P0B6 97 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 PROCRQ9UNN8 238 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 IFT52Q9Y366 437 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 HCFC1P51610 2035 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 PCNX3Q9H6A9 2034 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 PRRC2CQ9Y520 2896 aaKnown RBP4.74□□□□□ -1.65
CPSF7-220ENST00000541963 A0A0G2JND7 137 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 A0A0J9YW62 118 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 A0A1W2PNV4 684 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 A0A1W2PP18 115 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 FAM90A8PA6NJQ4 464 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 CYSRT1A8MQ03 144 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 A8MXE2 369 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 B4DXG7 233 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 NR5A2O00482 541 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 CTDSP2O14595 271 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 TNFSF11O14788 317 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 ANGPT2O15123 496 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 CXCL13O43927 109 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 EDF1O60869 148 aaKnown RBP4.74□□□□□ -1.65
CPSF7-220ENST00000541963 CIB2O75838 187 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 OPN1LWP04000 364 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 TFPTP0C1Z6 253 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 FAM90A13PP0C7W8 464 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 FAM90A24PP0C7X0 464 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 PSG1P11464 419 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 GABRB1P18505 474 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 IL11P20809 199 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 S100A1P23297 94 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 SFTPDP35247 375 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 COPZ1P61923 177 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 CSNK2A1P68400 391 aaPredicted RBP4.74□□□□□ -1.65
CPSF7-220ENST00000541963 MERTKQ12866 999 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 FOXF1Q12946 379 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 IRF3Q14653 427 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 RGNQ15493 299 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 SYPL1Q16563 259 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 NDUFA5Q16718 116 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.74□□□□□ -1.65
CPSF7-220ENST00000541963 PRAMEF8Q5VWM4 474 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 PRAMEF7Q5VXH5 474 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 C3orf33Q6P1S2 294 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 FRRS1Q6ZNA5 592 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 PQLC2Q6ZP29 291 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 GRINAQ7Z429 371 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 LUZP2Q86TE4 346 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 EPHX4Q8IUS5 362 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 GCNT2Q8N0V5 402 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 NRACQ8N912 160 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 ANKFN1Q8N957 763 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 OR9I1Q8NGQ6 314 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 OR6K3Q8NGY3 331 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 OR52P1PQ8NH57 321 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 FNDC9Q8TBE3 224 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 PNPT1Q8TCS8 783 aaKnown RBP4.74□□□□□ -1.65
CPSF7-220ENST00000541963 FIG4Q92562 907 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 GTF2H4Q92759 462 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 MCUR1Q96AQ8 359 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 VPS33AQ96AX1 596 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 STARD4Q96DR4 205 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 LURAP1Q96LR2 239 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 DACH2Q96NX9 599 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 CGREF1Q99674 301 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 EBF4Q9BQW3 602 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 PALMDQ9NP74 551 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 PLSCR4Q9NRQ2 329 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 ACER3Q9NUN7 267 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 LEF1Q9UJU2 399 aaPredicted RBP4.74□□□□□ -1.65
CPSF7-220ENST00000541963 NDUFAF1Q9Y375 327 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 COL12A1Q99715 3063 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 CACNA1DQ01668 2161 aa4.74□□□□□ -1.65
CPSF7-220ENST00000541963 DNAJC9-AS1A6NH13 148 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 A8MV72 311 aaPredicted RBP4.73□□□□□ -1.65
CPSF7-220ENST00000541963 H0YC42 278 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 C16orf97H3BN30 126 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF701M0R085 212 aaPredicted RBP4.73□□□□□ -1.65
CPSF7-220ENST00000541963 SULT2B1O00204 365 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 FAAHO00519 579 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 VCYO14598 125 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 WNT9BO14905 357 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF208O43345 1280 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 SS18L1O75177 396 aaPredicted RBP4.73□□□□□ -1.65
CPSF7-220ENST00000541963 ATP6V1G1O75348 118 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 SERPINB7O75635 380 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms