RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 HCCSP53701 268 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 ZNF91Q05481 1191 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 SGCAQ16586 387 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 SLC35D3Q5M8T2 416 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 DNM1P34Q6PK57 102 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 Q6ZT83 130 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 FOXL2NBQ6ZUU3 175 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 CXorf67Q86X51 503 aaPredicted RBP8.2□□□□□ -1.1
DDX55-208ENST00000541259 GID4Q8IVV7 300 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 GLB1L2Q8IW92 636 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 GABRG1Q8N1C3 465 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 ZNF786Q8N393 782 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 OR4F15Q8NGB8 312 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 FNDC8Q8TC99 324 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 C11orf40Q8WZ69 217 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 SGCDQ92629 289 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 GGHQ92820 318 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 NABP1Q96AH0 204 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 RNFT2Q96EX2 444 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 Q96MT0 163 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 RACGAP1Q9H0H5 632 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 WDR76Q9H967 626 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 EMC7Q9NPA0 242 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 JKAMPQ9P055 326 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 MALT1Q9UDY8 824 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 ERRFI1Q9UJM3 462 aaPredicted RBP8.2□□□□□ -1.1
DDX55-208ENST00000541259 MOKQ9UQ07 419 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 FLNCQ14315 2725 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 A0A096LPE4 126 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 A0A1W2PPZ6 126 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 SLC22A31A6NKX4 558 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 A8MXE2 369 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 ZNF99A8MXY4 864 aaPredicted RBP8.19□□□□□ -1.1
DDX55-208ENST00000541259 SLC1A7O00341 560 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 DVL2O14641 736 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 MSTNO14793 375 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 SELENOFO60613 162 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 ZG16O60844 167 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 FAM20BO75063 409 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 LYZL6O75951 148 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 HLA-DQA2P01906 255 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 DBTP11182 482 aaKnown RBP8.19□□□□□ -1.1
DDX55-208ENST00000541259 NR2C1P13056 603 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 B4GALT1P15291 398 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 MPGP29372 298 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 NAA10P41227 235 aaPredicted RBP8.19□□□□□ -1.1
DDX55-208ENST00000541259 SLC15A1P46059 708 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 MTNR1AP48039 350 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 ZNF84P51523 738 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 TEKQ02763 1124 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 MVKQ03426 396 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 HSF2Q03933 536 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 PIGFQ07326 219 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 KLHL24Q6TFL4 600 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 ZNF813Q6ZN06 617 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 BEND4Q6ZU67 534 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 ERI1Q8IV48 349 aaKnown RBP8.19□□□□□ -1.1
DDX55-208ENST00000541259 TIGD4Q8IY51 512 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 LRRC18Q8N456 261 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 ZNF433Q8N7K0 673 aaPredicted RBP8.19□□□□□ -1.1
DDX55-208ENST00000541259 SLC26A10Q8NG04 563 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 OR51G2Q8NGK0 314 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 OR1K1Q8NGR3 316 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 FGFBP3Q8TAT2 258 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 RFKQ969G6 155 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 LGALS12Q96DT0 336 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 FOXB1Q99853 325 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 SH3GL3Q99963 347 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 NELFAQ9H3P2 528 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 PIGMQ9H3S5 423 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 MARCH7Q9H992 704 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 ADGRL4Q9HBW9 690 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 POLE4Q9NR33 117 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 PLCXD1Q9NUJ7 323 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 TMEM38BQ9NVV0 291 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 PAK1IP1Q9NWT1 392 aaPredicted RBP8.19□□□□□ -1.1
DDX55-208ENST00000541259 WARS2Q9UGM6 360 aaKnown RBP8.19□□□□□ -1.1
DDX55-208ENST00000541259 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.19□□□□□ -1.1
DDX55-208ENST00000541259 LRCH1Q9Y2L9 728 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 RPL36Q9Y3U8 105 aaKnown RBP8.19□□□□□ -1.1
DDX55-208ENST00000541259 MYO18BQ8IUG5 2567 aa8.19□□□□□ -1.1
DDX55-208ENST00000541259 NKX2-6A6NCS4 301 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 ZNF503-AS2A6NEH8 195 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 FAM90A27PA6NNH2 459 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 PTGES3LE9PB15 166 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 ZNF593O00488 134 aaPredicted RBP8.18□□□□□ -1.1
DDX55-208ENST00000541259 RAD51DO75771 328 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 CNOT4O95628 575 aaKnown RBP8.18□□□□□ -1.1
DDX55-208ENST00000541259 SBK2P0C263 348 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 PATE4P0C8F1 98 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 COX5AP20674 150 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 CRHBPP24387 322 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 CHRNB4P30926 498 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 CXCR4P61073 352 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 MRPS34P82930 218 aaKnown RBP8.18□□□□□ -1.1
DDX55-208ENST00000541259 GLO1Q04760 184 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 FAM27E3Q08E93 113 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 ENDOGQ14249 297 aaKnown RBP8.18□□□□□ -1.1
DDX55-208ENST00000541259 GGTLC2Q14390 218 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 STK11Q15831 433 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms