RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, human

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM65-203	ENST00000540812	TAS2R41	P59536	307 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	FMOD	Q06828	376 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	HNRNPA0	Q13151	305 aa	Known RBP	13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	THEM4	Q5T1C6	240 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	INTS11	Q5TA45	600 aa	Known RBP	13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	PIGW	Q7Z7B1	504 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	PEG10	Q86TG7	708 aa	Known RBP	13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	OR8J3	Q8NGG0	315 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	AKR7L	Q8NHP1	331 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	NSMAF	Q92636	917 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	RAB39B	Q96DA2	213 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	POM121L2	Q96KW2	1035 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	MYLK2	Q9H1R3	596 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	SAP30L	Q9HAJ7	183 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	SIAE	Q9HAT2	523 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	GID8	Q9NWU2	228 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	SH3GLB1	Q9Y371	365 aa		13.8	□□□□□ -0.2
TRIM65-203	ENST00000540812	ARHGAP32	A7KAX9	2087 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	LOC100509620	A0A075B734	347 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	FXYD1	O00168	92 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	IGHV1-46	P01743	117 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	TSPAN19	P0C672	248 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	ANPEP	P15144	967 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	RBM34	P42696	430 aa	Known RBP	13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	COMP	P49747	757 aa	Predicted RBP	13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	ZNF81	P51508	661 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	MMP15	P51511	669 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	MRPS34	P82930	218 aa	Known RBP	13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	PIN1	Q13526	163 aa	Predicted RBP	13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	LAPTM4A	Q15012	233 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	SGCA	Q16586	387 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	MOG	Q16653	247 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	NANOGP8	Q6NSW7	305 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	RFPL4B	Q6ZWI9	263 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	USP43	Q70EL4	1123 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	HDDC2	Q7Z4H3	204 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	C1QL2	Q7Z5L3	287 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	CALHM3	Q86XJ0	350 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	FAM216A	Q8WUB2	273 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	TMEM239	Q8WW34	195 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	RASSF5	Q8WWW0	418 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	ELMOD3	Q96FG2	381 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	MARS2	Q96GW9	593 aa	Known RBP	13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	CCNB1IP1	Q9NPC3	277 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812	RIMS3	Q9UJD0	308 aa		13.79	□□□□□ -0.2
TRIM65-203	ENST00000540812		A0A0G2JMP0	313 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812		A0A0X1KG70	313 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	TMEM89	A2RUT3	159 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	C5orf49	A4QMS7	147 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	ZSCAN5B	A6NJL1	495 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	OR5F1	O95221	314 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	COX4I1	P13073	169 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	ERVK-25	P63136	954 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	PSG4	Q00888	419 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	CD47	Q08722	323 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	HFE	Q30201	348 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	SPRN	Q5BIV9	151 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	RABL3	Q5HYI8	236 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	SLC25A47	Q6Q0C1	308 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	CLDN22	Q8N7P3	220 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	OR4M2	Q8NGB6	313 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	SLC25A40	Q8TBP6	338 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	CCL17	Q92583	94 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	GCDH	Q92947	438 aa	Predicted RBP	13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	CMTM5	Q96DZ9	223 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	TIMD4	Q96H15	378 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	SLC6A7	Q99884	636 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	OR2J1	Q9GZK6	312 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	KCNN2	Q9H2S1	579 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	ARL2BP	Q9Y2Y0	163 aa		13.78	□□□□□ -0.2
TRIM65-203	ENST00000540812	TRIM77	I1YAP6	450 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	PIP5K1C	O60331	668 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	UBOX5	O94941	541 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	IGF2	P01344	180 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	MT-ND5	P03915	603 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	FUT4	P22083	530 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	GCH1	P30793	250 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	RBMX	P38159	391 aa	Known RBP	13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	OR1E2	P47887	323 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	GDI2	P50395	445 aa	Known RBP	13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	TOP3A	Q13472	1001 aa	Predicted RBP	13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	ZNF718	Q3SXZ3	478 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	FAM209A	Q5JX71	171 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	DCAF12L2	Q5VW00	463 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	TREML1	Q86YW5	311 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	TEX29	Q8N6K0	151 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	POU5F2	Q8N7G0	328 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	ABHD4	Q8TB40	342 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	KLF14	Q8TD94	323 aa	Predicted RBP	13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	LIPH	Q8WWY8	451 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	RAB1C	Q92928	201 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	RBM4	Q9BWF3	364 aa	Known RBP	13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	WNT5B	Q9H1J7	359 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	TXNIP	Q9H3M7	391 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	SMURF2	Q9HAU4	748 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	ESM1	Q9NQ30	184 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	STX18	Q9P2W9	335 aa	Known RBP	13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	OPN4	Q9UHM6	478 aa		13.77	□□□□□ -0.21
TRIM65-203	ENST00000540812	BAG5	Q9UL15	447 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms