RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 RLN2P04090 185 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 MGMTP16455 207 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 SLC6A8P48029 635 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 LY6G6FQ5SQ64 297 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 GLT8D1Q68CQ7 371 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 TMEM225Q6GV28 225 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 SLC18B1Q6NT16 456 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 PARGQ86W56 976 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 PLPP7Q8NBV4 271 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 STK35Q8TDR2 534 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 MMABQ96EY8 250 aaPredicted RBP11.08□□□□□ -0.64
NPC1-202ENST00000540608 SCPEP1Q9HB40 452 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 DHDHQ9UQ10 334 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 A0A0D9SG52 128 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 TEX46H3BTG2 121 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 TOR1AO14656 332 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 IGHV4-34P06331 123 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 CD37P11049 281 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 AGTR1P30556 359 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 SLC37A1P57057 533 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 ROM1Q03395 351 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 BIKQ13323 160 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 SLC35D2Q76EJ3 337 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 ZNF546Q86UE3 836 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 PPP1R14AQ96A00 147 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 MRPS24Q96EL2 167 aaKnown RBP11.08□□□□□ -0.64
NPC1-202ENST00000540608 TCTN2Q96GX1 697 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 NXF5Q9H1B4 397 aaKnown RBP11.08□□□□□ -0.64
NPC1-202ENST00000540608 SLCO5A1Q9H2Y9 848 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 ZC4H2Q9NQZ6 224 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 A0A1W2PPC1 479 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 ATP6V1G2-DDX39BF2Z307 99 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 RAD1O60671 282 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 CD8AP01732 235 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 UBBP0CG47 229 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 UBCP0CG48 685 aaKnown RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 CXCR1P25024 350 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 HTR2CP28335 458 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 RPS27AP62979 156 aaKnown RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 UBA52P62987 128 aaKnown RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 MRPS21P82921 87 aaKnown RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 FGL1Q08830 312 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 ZNF321PQ8N8H1 164 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 PXT1Q8NFP0 134 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 OR52H1Q8NGJ2 320 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 PTPMT1Q8WUK0 201 aaPredicted RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 ASB5Q8WWX0 329 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 SLC41A2Q96JW4 573 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 CKLFQ9UBR5 152 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 CEP290O15078 2479 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 TRAV36DV7A0A075B6V5 113 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 A0A1B0GW55 424 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 PRSS37A4D1T9 235 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 C11orf98E9PRG8 122 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 PRAMEF26H0Y7S4 382 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 EIF4E2O60573 245 aaKnown RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 DUX4L2P0CJ85 424 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 DUX4L3P0CJ86 424 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 DUX4L4P0CJ87 422 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 DUX4L5P0CJ88 424 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 DUX4L6P0CJ89 424 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 DUX4L7P0CJ90 424 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 IGFBP3P17936 291 aaPredicted RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 DRD1P21728 446 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 CENPAP49450 140 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 SRSF4Q08170 494 aaKnown RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 OTPQ5XKR4 325 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 NDUFAF7Q7L592 441 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 ZNF627Q7L945 461 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 METTL27Q8N6F8 245 aaPredicted RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 METTL21AQ8WXB1 218 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 ST8SIA2Q92186 375 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 SLC46A1Q96NT5 459 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 DNTTIP1Q9H147 329 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 DUX4Q9UBX2 424 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 ZNF107Q9UII5 783 aaPredicted RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 TMEM184BQ9Y519 407 aaPredicted RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 SLCO1B1Q9Y6L6 691 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 MYO15AQ9UKN7 3530 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 TDRD6O60522 2096 aaKnown RBP11.07□□□□□ -0.64
NPC1-202ENST00000540608 PRUNE2Q8WUY3 3088 aa11.07□□□□□ -0.64
NPC1-202ENST00000540608 DOK2O60496 412 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 OR6A2O95222 327 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 WDPCPO95876 746 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 ZNF735P0CB33 412 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 CTSEP14091 401 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 RPL27P61353 136 aaKnown RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 GLYATL3Q5SZD4 288 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 C1QL3Q5VWW1 255 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 KCTD18Q6PI47 426 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 TMED4Q7Z7H5 227 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 BEST3Q8N1M1 668 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 FAM160A2Q8N612 972 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 STEAP2Q8NFT2 490 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 C8orf44Q96CB5 159 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 ZNF285Q96NJ3 590 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 FOXN4Q96NZ1 517 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 ZNF587Q96SQ5 575 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 ADOQ96SZ5 270 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 EDEM2Q9BV94 578 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms