RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CYBRD1Q53TN4 286 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 ARMC4Q5T2S8 1044 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 USP51Q70EK9 711 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 ZER1Q7Z7L7 766 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 TSPYL5Q86VY4 417 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-211ENST00000539843 CALHM3Q86XJ0 350 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 PAQR4Q8N4S7 273 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-211ENST00000539843 OR4M2Q8NGB6 313 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 C10orf82Q8WW14 230 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 RACGAP1Q9H0H5 632 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 ZNF665Q9H7R5 613 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 C20orf141Q9NUB4 165 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 HIF3AQ9Y2N7 669 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 ELOVL7A1L3X0 281 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 FAM157AC9JC47 383 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 H3BSA7 217 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 RP2O75695 350 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 IGHV3-13P01766 116 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 IFNW1P05000 195 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 MMP7P09237 267 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-211ENST00000539843 ZNF32P17041 273 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 CDAP32320 146 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 KDELR2P33947 212 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 RPL27P61353 136 aaKnown RBP13.06□□□□□ -0.32
UBE3B-211ENST00000539843 ERVS71-1P61550 626 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 KLF10Q13118 480 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 TSTQ16762 297 aaKnown RBP13.06□□□□□ -0.32
UBE3B-211ENST00000539843 RRM2BQ7LG56 351 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 MEX3DQ86XN8 651 aaKnown RBP13.06□□□□□ -0.32
UBE3B-211ENST00000539843 MOSPD2Q8NHP6 518 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 BPIFA2Q96DR5 249 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 DIRC2Q96SL1 478 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 GAL3ST1Q99999 423 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 WACQ9BTA9 647 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 FNDC11Q9BVV2 318 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 NDRG4Q9ULP0 352 aaKnown RBP13.06□□□□□ -0.32
UBE3B-211ENST00000539843 TIMM10BQ9Y5J6 103 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 CAPN7Q9Y6W3 813 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 CUBNO60494 3623 aa13.06□□□□□ -0.32
UBE3B-211ENST00000539843 A0A1W2PPL8 197 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 ISPDA4D126 451 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 C12orf71A8MTZ7 269 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 GSTA4O15217 222 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 SPRY3O43610 288 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 MPZL1O95297 269 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 CST2P09228 141 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 GSTM3P21266 225 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 TNFSF4P23510 183 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 GATA3P23771 443 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 CRYBA2P53672 197 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 CTXN1P60606 82 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 ERVK-25P63136 954 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 ACTG1P63261 375 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 SELENOWP63302 87 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 LAPTM4AQ15012 233 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 TRAM2Q15035 370 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 AVPI1Q5T686 147 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 FAM27BQ5VT28 67 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 OAFQ86UD1 273 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 MICU2Q8IYU8 434 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 ABHD4Q8TB40 342 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 ST7LQ8TDW4 575 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 HDAC2Q92769 488 aaKnown RBP13.05□□□□□ -0.32
UBE3B-211ENST00000539843 TSPAN32Q96QS1 320 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 ZDHHC8Q9ULC8 765 aa13.05□□□□□ -0.32
UBE3B-211ENST00000539843 LOC100653049A0A140TA62 436 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 EFCAB9A8MZ26 197 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 TRIM77I1YAP6 450 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 J3QLI3 93 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 FXYD1O00168 92 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 XKRYO14609 159 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 SLC22A2O15244 555 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 KRT34O76011 436 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 IGHMP01871 453 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 MSR1P21757 451 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 RPL4P36578 427 aaKnown RBP13.04□□□□□ -0.32
UBE3B-211ENST00000539843 SLC9A3P48764 834 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 LMO4P61968 165 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 FMODQ06828 376 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 SPATA46Q5T0L3 261 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 MBNL2Q5VZF2 373 aaKnown RBP13.04□□□□□ -0.32
UBE3B-211ENST00000539843 THSD4Q6ZMP0 1018 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 SYT9Q86SS6 491 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 CYP4Z1Q86W10 505 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 GEMIN6Q8WXD5 167 aaKnown RBP13.04□□□□□ -0.32
UBE3B-211ENST00000539843 CCL17Q92583 94 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 POM121L2Q96KW2 1035 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 COG8Q96MW5 612 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 ZNF583Q96ND8 569 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 OR2H1Q9GZK4 316 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 SAR1AQ9NR31 198 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 GRHPRQ9UBQ7 328 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 WIPI2Q9Y4P8 454 aa13.04□□□□□ -0.32
UBE3B-211ENST00000539843 NDUFAB1O14561 156 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 TIMM8AO60220 97 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-211ENST00000539843 ZNF682O95780 498 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 TSPAN19P0C672 248 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 EPHA1P21709 976 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 TUBG1P23258 451 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 LAP3P28838 519 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms