RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 RFPL4BQ6ZWI9 263 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 FAM26EQ8N5C1 309 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 TCEANCQ8N8B7 351 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 OR2T4Q8NH00 348 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 NSMAFQ92636 917 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 DDOQ99489 341 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 APOL4Q9BPW4 351 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 HDHD5Q9BXW7 423 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 MROQ9BYG7 248 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 NUAK2Q9H093 628 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 SRA1Q9HD15 236 aaKnown RBP13.58□□□□□ -0.24
DDB1-216ENST00000539739 GPR52Q9Y2T5 361 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 FKBP7Q9Y680 259 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 NKX2-6A6NCS4 301 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 INHBBP09529 407 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 CTLA4P16410 223 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 IGHV1-2P23083 117 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 CD79BP40259 229 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 SLC25A1P53007 311 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 FBXL19-AS1Q494R0 122 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 C9orf135Q5VTT2 229 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 LINGO2Q7L985 606 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 CXorf67Q86X51 503 aaPredicted RBP13.57□□□□□ -0.24
DDB1-216ENST00000539739 OR8J1Q8NGP2 316 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 TMEM163Q8TC26 289 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 KISS1RQ969F8 398 aaPredicted RBP13.57□□□□□ -0.24
DDB1-216ENST00000539739 IL4I1Q96RQ9 567 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 CENPOQ9BU64 300 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 H2AFY2Q9P0M6 372 aaPredicted RBP13.57□□□□□ -0.24
DDB1-216ENST00000539739 KCNN3Q9UGI6 736 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 FAM183AA6NL82 134 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 SNTNA6NMZ2 147 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 ZNF99A8MXY4 864 aaPredicted RBP13.57□□□□□ -0.24
DDB1-216ENST00000539739 PRKYO43930 277 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 MPZL2O60487 215 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 LYZL6O75951 148 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 ITGA5P08648 1049 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 COX5AP20674 150 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 CENPAP49450 140 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 ADARB1P78563 741 aaKnown RBP13.57□□□□□ -0.24
DDB1-216ENST00000539739 KCTD21Q4G0X4 260 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 SFRP5Q5T4F7 317 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 PLBD1Q6P4A8 553 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 IDO2Q6ZQW0 420 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 CXXC5Q7LFL8 322 aaKnown RBP13.57□□□□□ -0.24
DDB1-216ENST00000539739 CPOQ8IVL8 374 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 OR6V1Q8N148 313 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 ZNF433Q8N7K0 673 aaPredicted RBP13.57□□□□□ -0.24
DDB1-216ENST00000539739 LINC00469Q8N7U9 141 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 SETD9Q8NE22 299 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 SSC4DQ8WTU2 575 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 RNASE6Q93091 150 aaKnown RBP13.57□□□□□ -0.24
DDB1-216ENST00000539739 ZNF837Q96EG3 531 aaPredicted RBP13.57□□□□□ -0.24
DDB1-216ENST00000539739 TSSK2Q96PF2 358 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 FOXB1Q99853 325 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 RACGAP1Q9H0H5 632 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 MARCH7Q9H992 704 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 B9D1Q9UPM9 204 aa13.57□□□□□ -0.24
DDB1-216ENST00000539739 IGKV1D-43A0A0B4J1Z2 117 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 WIPF3A6NGB9 483 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 PSMB1P20618 241 aaKnown RBP13.56□□□□□ -0.24
DDB1-216ENST00000539739 FOXG1P55316 489 aaPredicted RBP13.56□□□□□ -0.24
DDB1-216ENST00000539739 ARF1P84077 181 aaKnown RBP13.56□□□□□ -0.24
DDB1-216ENST00000539739 EFNB1P98172 346 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 FAM27E3Q08E93 113 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 IL18R1Q13478 541 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 OXA1LQ15070 435 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 CDSNQ15517 529 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 TRIM16LQ309B1 348 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 OR7E24Q6IFN5 339 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 ZBTB46Q86UZ6 589 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 CADM3Q8N126 398 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 PROKR2Q8NFJ6 384 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 OR9Q1Q8NGQ5 310 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 TFAP2CQ92754 450 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 PTP4A1Q93096 173 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 NMNAT2Q9BZQ4 307 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 OR51V1Q9H2C8 321 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 MED20Q9H944 212 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 SEC61A2Q9H9S3 476 aa13.56□□□□□ -0.24
DDB1-216ENST00000539739 HINT3Q9NQE9 182 aaKnown RBP13.56□□□□□ -0.24
DDB1-216ENST00000539739 A0A1W2PPL8 197 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 TRIM64BA6NI03 449 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 C16orf97H3BN30 126 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 M0R129 80 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 DCTN6O00399 190 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 SPI1P17947 270 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 NPR2P20594 1047 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 LAP3P28838 519 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 HOXC12P31275 282 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 GLO1Q04760 184 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 ETFDHQ16134 617 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 KLHL12Q53G59 568 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 C6orf52Q5T4I8 152 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 ZNF691Q5VV52 312 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 ANKRD16Q6P6B7 361 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 STAC2Q6ZMT1 411 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 ZNF813Q6ZN06 617 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 BHLHA15Q7RTS1 189 aaPredicted RBP13.55□□□□□ -0.24
DDB1-216ENST00000539739 GLB1L2Q8IW92 636 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms