RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 KLF3P57682 345 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 PSG4Q00888 419 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 GLO1Q04760 184 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 FAM205BPQ63HN1 556 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 CYP4Z1Q86W10 505 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 C11orf40Q8WZ69 217 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 RDH5Q92781 318 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 YIPF5Q969M3 257 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 BCL2L14Q9BZR8 327 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 NARFLQ9H6Q4 476 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ENPP4Q9Y6X5 453 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 C5orf49A4QMS7 147 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 A6NIZ1 184 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ZNF26P17031 533 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SLC9A3P48764 834 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 RAP1BP61224 184 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 RAP1AP62834 184 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ANKDD1AQ495B1 522 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 FAM27BQ5VT28 67 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 RRM2BQ7LG56 351 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 RNF148Q8N7C7 305 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 OR1J1Q8NGS3 322 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 GTF3AQ92664 365 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 HPS1Q92902 700 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 FAM46AQ96IP4 442 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 OR2H1Q9GZK4 316 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 HINT3Q9NQE9 182 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ADA2Q9NZK5 511 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 RPS6KA6Q9UK32 745 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ADAM18Q9Y3Q7 739 aa16.31■□□□□ 0.2
TNFRSF1A-212ENST00000539372 IGLV3-9A0A075B6K5 115 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 LOC100509620A0A075B734 347 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 H1F0P07305 194 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SRD5A1P18405 259 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 WNT5AP41221 380 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 GUCA1AP43080 201 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 GPR6P46095 362 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 GDI2P50395 445 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ZBED5Q49AG3 693 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SPATA46Q5T0L3 261 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 GLYATQ6IB77 296 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 TMEM154Q6P9G4 183 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 TMPRSS11FQ6ZWK6 438 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ZNF101Q8IZC7 436 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 FNDC8Q8TC99 324 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SLC7A13Q8TCU3 470 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SNX33Q8WV41 574 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 POM121L2Q96KW2 1035 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 Q96M85 177 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 WNT5BQ9H1J7 359 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SPAG4Q9NPE6 437 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ZNF275Q9NSD4 429 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SLCO1C1Q9NYB5 712 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 NDUFAF4Q9P032 175 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 GRHPRQ9UBQ7 328 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 GPR160Q9UJ42 338 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 FAM32AQ9Y421 112 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 COL6A5A8TX70 2615 aa16.3■□□□□ 0.2
TNFRSF1A-212ENST00000539372 C17orf100A8MU93 164 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 PHF1O43189 567 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ATP8B1O43520 1251 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 CDC14BO60729 498 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 DIRAS1O95057 198 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SCG5P05408 212 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 CST2P09228 141 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 DRD4P21917 467 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ACHEP22303 614 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 PRDX6P30041 224 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 CCL8P80075 99 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 CR1LQ2VPA4 569 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 FGD3Q5JSP0 725 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 FOXL2NBQ6ZUU3 175 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 FAM86B1Q8N7N1 296 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 LINC01356Q8N9X3 169 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 FAM156AQ8NDB6 213 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SPATA3Q8NHX4 192 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ANKRD19PQ9H560 264 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 EIF3KQ9UBQ5 218 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 V9GYQ6 96 aa16.29■□□□□ 0.2
TNFRSF1A-212ENST00000539372 WNT9BO14905 357 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 PPIHO43447 177 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SNX3O60493 162 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 CD14P08571 375 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 HNF1AP20823 631 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 MSR1P21757 451 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 CDH15P55291 814 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ENDOGQ14249 297 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 MESTQ5EB52 335 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ZNF774Q6NX45 483 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 UGT2A3Q6UWM9 527 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 CPLX4Q7Z7G2 160 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ABHD4Q8TB40 342 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ZNF416Q9BWM5 594 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 NSRP1Q9H0G5 558 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 EMC7Q9NPA0 242 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 DCAF13Q9NV06 445 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 TMEM5Q9Y2B1 443 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 TIMM10BQ9Y5J6 103 aa16.28■□□□□ 0.2
TNFRSF1A-212ENST00000539372 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.27■□□□□ 0.28e-7■■■□□ 17
TNFRSF1A-212ENST00000539372 TEX13CA0A0J9YWL9 993 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms