RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 B3GALNT1O75752 331 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 RBBP9O75884 186 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 MT-ATP6P00846 226 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 MAS1P04201 325 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 NME1P15531 152 aaKnown RBP13.11□□□□□ -0.31
CDCA3-207ENST00000538862 SSTR2P30874 369 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 RAP2BP61225 183 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 B2MP61769 119 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 EXOSC2Q13868 293 aaKnown RBP13.11□□□□□ -0.31
CDCA3-207ENST00000538862 GRK1Q15835 563 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 ZNF626Q68DY1 528 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 ANKRD16Q6P6B7 361 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 MAMDC2Q7Z304 686 aaPredicted RBP13.11□□□□□ -0.31
CDCA3-207ENST00000538862 C17orf82Q86X59 251 aaPredicted RBP13.11□□□□□ -0.31
CDCA3-207ENST00000538862 PM20D2Q8IYS1 436 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 FTMTQ8N4E7 242 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 DNAAF1Q8NEP3 725 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 MVB12AQ96EY5 273 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 C4orf45Q96LM5 186 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 TGM7Q96PF1 710 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 SEC22CQ9BRL7 303 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 CUTCQ9NTM9 273 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 GLTPQ9NZD2 209 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 PIPOXQ9P0Z9 390 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 ATPIF1Q9UII2 106 aa13.11□□□□□ -0.31
CDCA3-207ENST00000538862 MAP1BP46821 2468 aaKnown RBP13.1□□□□□ -0.31
CDCA3-207ENST00000538862 TTLL8A6PVC2 850 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 TO15178 435 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 YKT6O15498 198 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 HCRTR2O43614 444 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 PIAS2O75928 621 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 OR2A4O95047 310 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 DDAH2O95865 285 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 PTHLHP12272 177 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 GFERP55789 205 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 SLC17A1Q14916 467 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 ELAVL1Q15717 326 aaKnown RBP13.1□□□□□ -0.31
CDCA3-207ENST00000538862 OR10AC1Q8NH08 325 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 RBP7Q96R05 134 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 OR2A7Q96R45 310 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 OR8B4Q96RC9 309 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 SLC17A5Q9NRA2 495 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 MAB21L2Q9Y586 359 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 PTPRBP23467 1997 aa13.1□□□□□ -0.31
CDCA3-207ENST00000538862 RPS10-NUDT3A0A1W2PQS6 291 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 TUBAL3A6NHL2 446 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 A8MUA0 341 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 ALG1L2C9J202 215 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 M0R233 179 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 CSF1P09603 554 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 TMIGD3P0DMS9 266 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-207ENST00000538862 MYF5P13349 255 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 PGCP20142 388 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 IL12BP29460 328 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 KIR3DL2P43630 455 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 PSMA6P60900 246 aaKnown RBP13.09□□□□□ -0.31
CDCA3-207ENST00000538862 TSPAN5P62079 268 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 RBMS2Q15434 407 aaKnown RBP13.09□□□□□ -0.31
CDCA3-207ENST00000538862 SGCBQ16585 318 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 RFPL4BQ6ZWI9 263 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 OR51A4Q8NGJ6 313 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 LMX1AQ8TE12 382 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 METTL21AQ8WXB1 218 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 ZDHHC12Q96GR4 267 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 CDC6Q99741 560 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 DHRS9Q9BPW9 319 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 KLHDC3Q9BQ90 382 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 TMPRSS13Q9BYE2 586 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 RTN4RQ9BZR6 473 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 ELOVL3Q9HB03 270 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 ZNF69Q9UC07 566 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 KCNG2Q9UJ96 466 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 B9D1Q9UPM9 204 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 WASF3Q9UPY6 502 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 COL5A1P20908 1838 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-207ENST00000538862 IGF2RP11717 2491 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 PLSCR5A0PG75 271 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 PRSS37A4D1T9 235 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 GGT3PA6NGU5 568 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 TSPAN2O60636 221 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 CTAG2O75638 210 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 TOXO94900 526 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 ALDOBP05062 364 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 ANXA7P20073 488 aaKnown RBP13.09□□□□□ -0.31
CDCA3-207ENST00000538862 IL32P24001 234 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 PPM1FP49593 454 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-207ENST00000538862 RAB14P61106 215 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 RPL27P61353 136 aaKnown RBP13.09□□□□□ -0.31
CDCA3-207ENST00000538862 WDR38Q5JTN6 314 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 TOR2AQ5JU69 321 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 TEX30Q5JUR7 227 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 TTLL10Q6ZVT0 673 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 GLRX5Q86SX6 157 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 ZNF679Q8IYX0 411 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 PRR22Q8IZ63 422 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 TSLPQ969D9 159 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 SCNM1Q9BWG6 230 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 KNTC1P50748 2209 aa13.09□□□□□ -0.31
CDCA3-207ENST00000538862 ASXL3Q9C0F0 2248 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 TEX51A0A1B0GUA7 166 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms