RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 F13BP05160 661 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 IGHV4-38-2P0DP08 117 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 SLC6A9P48067 706 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 GDI2P50395 445 aaKnown RBP11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 WDR4P57081 412 aaKnown RBP11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 PPP1CBP62140 327 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 ERVK-25P63136 954 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 NPTX1Q15818 432 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 HIST3H3Q16695 136 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 HSP90B2PQ58FF3 399 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 ENTPD8Q5MY95 495 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 LRIF1Q5T3J3 769 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 MBNL2Q5VZF2 373 aaKnown RBP11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 BHLHE22Q8NFJ8 381 aaPredicted RBP11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 OR6T1Q8NGN1 323 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 VANGL1Q8TAA9 524 aaPredicted RBP11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 TMIGD2Q96BF3 282 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 POM121L2Q96KW2 1035 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 DIRC2Q96SL1 478 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 PATZ1Q9HBE1 687 aaKnown RBP11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 CYSLTR2Q9NS75 346 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 TMEM106BQ9NUM4 274 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 VAPAQ9P0L0 249 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 OR5V1Q9UGF6 321 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 ZNF229Q9UJW7 825 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 ZDHHC8Q9ULC8 765 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 A0A1W2PRG6 482 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 TIMM8AO60220 97 aaPredicted RBP11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 MGRN1O60291 552 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 FMO6PO60774 539 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 NGFP01138 241 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 THY1P04216 161 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 ADH4P08319 380 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 ASAH2BP0C7U1 165 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 MTNR1AP48039 350 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 STX1BP61266 288 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 FMODQ06828 376 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 RPL18Q07020 188 aaKnown RBP11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 ZMYND11Q15326 602 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 SGCAQ16586 387 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 ESCO2Q56NI9 601 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 ZMAT1Q5H9K5 638 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 UNQ6126/PRO20091Q6UXV3 157 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 RBM45Q8IUH3 476 aaKnown RBP11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 PARP8Q8N3A8 854 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 OR52E2Q8NGJ4 325 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 ADAMTS16Q8TE57 1224 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 ASB10Q8WXI3 467 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 NSMAFQ92636 917 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 ARHGDIGQ99819 225 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 MRPL13Q9BYD1 178 aaKnown RBP11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 TMEM38AQ9H6F2 299 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 SIAEQ9HAT2 523 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 ANGPT4Q9Y264 503 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 POLR3KQ9Y2Y1 108 aaPredicted RBP11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 UGT2A1Q9Y4X1 527 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 DOCK11Q5JSL3 2073 aa11.79□□□□□ -0.52
SMARCA4-206ENST00000538456 TRMUO75648 421 aaKnown RBP11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 LYPD3O95274 346 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 KNG1P01042 644 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 CD55P08174 381 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 ACADSP16219 412 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 PPIBP23284 216 aaKnown RBP11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 LIPAP38571 399 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 BTG1P62324 171 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 MRPS34P82930 218 aaKnown RBP11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 PSG4Q00888 419 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 TAF11Q15544 211 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 DUSP7Q16829 419 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 TMEM155Q4W5P6 130 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 MTX3Q5HYI7 312 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 PAGE3Q5JUK9 113 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 C10orf128Q5T292 105 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 C17orf107Q6ZR85 190 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 TSPYL5Q86VY4 417 aaPredicted RBP11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 OR2Z1Q8NG97 314 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 GPR32P1Q8NGA4 272 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 WFDC12Q8WWY7 111 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 NABP1Q96AH0 204 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 SLC19A3Q9BZV2 496 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 EVA1AQ9H8M9 152 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 TNFRSF19Q9NS68 423 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 CCDC167Q9P0B6 97 aa11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 PDP1Q9P0J1 537 aaPredicted RBP11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 CGGBP1Q9UFW8 167 aaPredicted RBP11.78□□□□□ -0.52
SMARCA4-206ENST00000538456 IGKV1D-43A0A0B4J1Z2 117 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 TRAV40A0A0B4J280 105 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 TMEM120BA0PK00 339 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 TRAPPC13A5PLN9 417 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 A8MXK9 166 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 EVPLLA8MZ36 301 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 HOXA3O43365 443 aaPredicted RBP11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 TGDSO95455 350 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 GPX2P18283 190 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 CD80P33681 288 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 DAP3P51398 398 aaKnown RBP11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 CD47Q08722 323 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 TNFAIP8L3Q5GJ75 292 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms