RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 RIDAP52758 137 aaKnown RBP12.55□□□□□ -0.4
LIMK1-208ENST00000538333 RAG2P55895 527 aa12.55□□□□□ -0.4
LIMK1-208ENST00000538333 HSF1Q00613 529 aa12.55□□□□□ -0.4
LIMK1-208ENST00000538333 POU3F1Q03052 451 aaPredicted RBP12.55□□□□□ -0.4
LIMK1-208ENST00000538333 PLA2G7Q13093 441 aa12.55□□□□□ -0.4
LIMK1-208ENST00000538333 BTN2A1Q7KYR7 527 aa12.55□□□□□ -0.4
LIMK1-208ENST00000538333 BPHLQ86WA6 291 aaPredicted RBP12.55□□□□□ -0.4
LIMK1-208ENST00000538333 GLB1L2Q8IW92 636 aa12.55□□□□□ -0.4
LIMK1-208ENST00000538333 RASL10BQ96S79 203 aa12.55□□□□□ -0.4
LIMK1-208ENST00000538333 MED29Q9NX70 200 aa12.55□□□□□ -0.4
LIMK1-208ENST00000538333 ALKBH4Q9NXW9 302 aa12.55□□□□□ -0.4
LIMK1-208ENST00000538333 KLHL9Q9P2J3 617 aa12.55□□□□□ -0.4
LIMK1-208ENST00000538333 STEAP1Q9UHE8 339 aa12.55□□□□□ -0.4
LIMK1-208ENST00000538333 B3GALT5Q9Y2C3 310 aa12.55□□□□□ -0.4
LIMK1-208ENST00000538333 A0A1W2PNV4 684 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 TMIGD3P0DMS9 266 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-208ENST00000538333 ZNF28P17035 718 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 TCEA1P23193 301 aaKnown RBP12.54□□□□□ -0.4
LIMK1-208ENST00000538333 ZNF41P51814 821 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-208ENST00000538333 MAB21L1Q13394 359 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 IL11RAQ14626 422 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 PCOLCEQ15113 449 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 INPP5JQ15735 1006 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-208ENST00000538333 TMEM255AQ5JRV8 349 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 TMEM69Q5SWH9 247 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 FAM205BPQ63HN1 556 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 SLC7A5P1Q8MH63 180 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 ASCC1Q8N9N2 400 aaKnown RBP12.54□□□□□ -0.4
LIMK1-208ENST00000538333 SLC22A8Q8TCC7 542 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 ST7LQ8TDW4 575 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 ELP5Q8TE02 316 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 TSEN15Q8WW01 171 aaKnown RBP12.54□□□□□ -0.4
LIMK1-208ENST00000538333 TMEM246Q9BRR3 403 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 METTL7AQ9H8H3 244 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 WDR54Q9H977 334 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 AKAP7Q9P0M2 348 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-208ENST00000538333 KLHL13Q9P2N7 655 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 B3GAT1Q9P2W7 334 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 RCE1Q9Y256 329 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 LOC102723996A0A087X1L8 192 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 TTLL8A6PVC2 850 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 PATE3B3GLJ2 98 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 D6RAR5 112 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 NTN3O00634 580 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-208ENST00000538333 GMDSO60547 372 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 KRT33AO76009 404 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 TPPPO94811 219 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 MRPS10P82664 201 aaKnown RBP12.54□□□□□ -0.4
LIMK1-208ENST00000538333 C19orf57Q0VDD7 668 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 TNK1Q13470 666 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 FCN2Q15485 313 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 DNM1P34Q6PK57 102 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 MAML2Q8IZL2 1156 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-208ENST00000538333 ASB5Q8WWX0 329 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 SPACA9Q96E40 222 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-208ENST00000538333 HRASLSQ9HDD0 168 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 SDHAF3Q9NRP4 125 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 SERINC1Q9NRX5 453 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 KLK11Q9UBX7 282 aa12.54□□□□□ -0.4
LIMK1-208ENST00000538333 RAD1O60671 282 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 LDOC1O95751 146 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-208ENST00000538333 ECDO95905 644 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-208ENST00000538333 PTHLHP12272 177 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 TAS2R20P59543 309 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 MYBPHQ13203 477 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 NDUFA5Q16718 116 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 CLPPQ16740 277 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-208ENST00000538333 GSG1Q2KHT4 349 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 FAM166AQ6J272 317 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 NDUFAF7Q7L592 441 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 ZNF227Q86WZ6 799 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 OR2M3Q8NG83 312 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 ZFAND1Q8TCF1 268 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 FCAMRQ8WWV6 532 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 OR2M2Q96R28 347 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 GTPBP2Q9BX10 602 aaKnown RBP12.53□□□□□ -0.4
LIMK1-208ENST00000538333 DEFB126Q9BYW3 111 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 MRPL15Q9P015 296 aaKnown RBP12.53□□□□□ -0.4
LIMK1-208ENST00000538333 FBXL2Q9UKC9 423 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 FBXL3Q9UKT7 428 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 R4GMQ9 66 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 CFAP54Q96N23 3096 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 AQP8O94778 261 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 GLSO94925 669 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-208ENST00000538333 ITGA5P08648 1049 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 H2AFB2P0C5Z0 115 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 ZNF823P16415 610 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 P2RY4P51582 365 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 DCXRQ7Z4W1 244 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 OR11H7Q8NGC8 314 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 C5orf34Q96MH7 638 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 MED28Q9H204 178 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 G6PC2Q9NQR9 355 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 NXT1Q9UKK6 140 aaKnown RBP12.53□□□□□ -0.4
LIMK1-208ENST00000538333 GTF2A1LQ9UNN4 478 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 RPH3AQ9Y2J0 694 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-208ENST00000538333 CHCHD2Q9Y6H1 151 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-208ENST00000538333 DMDP11532 3685 aa12.53□□□□□ -0.4
LIMK1-208ENST00000538333 PHF3Q92576 2039 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms