RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 FER1L5A0AVI2 2057 aa7.83□□□□□ -1.16
UBE3B-208ENST00000538070 SLC22A23A1A5C7 686 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 HLA-DQB1P01920 261 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 PSMB1P20618 241 aaKnown RBP7.82□□□□□ -1.16
UBE3B-208ENST00000538070 GALP22466 123 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 SELENOPP49908 381 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 MMP15P51511 669 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 PNLIPRP2P54317 469 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 DCAF7P61962 342 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 TSPAN5P62079 268 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 DCDP81605 110 aaKnown RBP7.82□□□□□ -1.16
UBE3B-208ENST00000538070 RAB11BQ15907 218 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 SGCAQ16586 387 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 C2orf76Q3KRA6 126 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 C4orf46Q504U0 113 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 ANKRD37Q7Z713 158 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 PPP1R3BQ86XI6 285 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 WDFY1Q8IWB7 410 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 FTMTQ8N4E7 242 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 OR11H4Q8NGC9 324 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 SMIM4Q8WVI0 70 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 FGGYQ96C11 551 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 FAM71F1Q96KD3 344 aaPredicted RBP7.82□□□□□ -1.16
UBE3B-208ENST00000538070 ADAM19Q9H013 955 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 ELL3Q9HB65 397 aaPredicted RBP7.82□□□□□ -1.16
UBE3B-208ENST00000538070 DIABLOQ9NR28 239 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 DOCK7Q96N67 2140 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 PLPP3O14495 311 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 ALDOBP05062 364 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 ITGA5P08648 1049 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 FAM157BP0CG42 384 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 CD53P19397 219 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 DPP4P27487 766 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 GGTLC2Q14390 218 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 SGCBQ16585 318 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 NDUFA5Q16718 116 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 CD163Q86VB7 1156 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 GALNT6Q8NCL4 622 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 TNFAIP8L1Q8WVP5 186 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 FAM3DQ96BQ1 224 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 CMBLQ96DG6 245 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 SLC41A2Q96JW4 573 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 C4orf45Q96LM5 186 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF285Q96NJ3 590 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 PTDSS2Q9BVG9 487 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 TXNIPQ9H3M7 391 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 FBXL2Q9UKC9 423 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 FOXJ3Q9UPW0 622 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 PTRH2Q9Y3E5 179 aaKnown RBP7.82□□□□□ -1.16
UBE3B-208ENST00000538070 CACNA1HO95180 2353 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 FAM25EA8MYX2 175 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 EIF4E2O60573 245 aaKnown RBP7.82□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF780AO75290 641 aaPredicted RBP7.82□□□□□ -1.16
UBE3B-208ENST00000538070 C1QBP02746 253 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 CCL4P13236 92 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 SLC25A1P53007 311 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 CLRN1P58418 232 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 PSMA6P60900 246 aaKnown RBP7.82□□□□□ -1.16
UBE3B-208ENST00000538070 HSF2Q03933 536 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 LRRC37A5PQ49AS3 106 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.82□□□□□ -1.16
UBE3B-208ENST00000538070 PLCZ1Q86YW0 608 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 FAM71CQ8NEG0 241 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 OR5D18Q8NGL1 313 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 OR13C9Q8NGT0 318 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 MVB12AQ96EY5 273 aa7.82□□□□□ -1.16
UBE3B-208ENST00000538070 RIF1Q5UIP0 2472 aaKnown RBP7.81□□□□□ -1.16
UBE3B-208ENST00000538070 TMEM212A6NML5 194 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF28P17035 718 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 SLC6A9P48067 706 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 HSF1Q00613 529 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 ATXN7L3Q14CW9 347 aaPredicted RBP7.81□□□□□ -1.16
UBE3B-208ENST00000538070 TMEM71Q6P5X7 295 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 KLHL24Q6TFL4 600 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 NHLRC1Q6VVB1 395 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF679Q8IYX0 411 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 OR51S1Q8NGJ8 323 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 ZFAND1Q8TCF1 268 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 GNRHR2Q96P88 292 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 RBP7Q96R05 134 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 OR8B4Q96RC9 309 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 UBL7Q96S82 380 aaPredicted RBP7.81□□□□□ -1.16
UBE3B-208ENST00000538070 EXO5Q9H790 373 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 SDHAF3Q9NRP4 125 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 VSX1Q9NZR4 365 aaPredicted RBP7.81□□□□□ -1.16
UBE3B-208ENST00000538070 GPN3Q9UHW5 284 aaPredicted RBP7.81□□□□□ -1.16
UBE3B-208ENST00000538070 EML5Q05BV3 1969 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 FXYD6-FXYD2A0A087WZ82 144 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 LOC107986453A0A1B0GWG9 222 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 POM121CA8CG34 1229 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 ZNHIT1O43257 154 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 SEC14L5O43304 696 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 OR2T1O43869 369 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 SLC26A5P58743 744 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 ACY1Q03154 408 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 C17orf67Q0P5P2 114 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 GSG1Q2KHT4 349 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 RAET1LQ5VY80 246 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 SLC22A10Q63ZE4 541 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 LIN54Q6MZP7 749 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms