RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ST3GAL3Q11203 375 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 C1orf194Q5T5A4 169 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 GKN2Q86XP6 184 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 DND1Q8IYX4 353 aaKnown RBP7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 CBARPQ8N350 705 aaPredicted RBP7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 ZSCAN4Q8NAM6 433 aaPredicted RBP7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 REPS2Q8NFH8 660 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 SFXN5Q8TD22 340 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 CORO2AQ92828 525 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 AQP10Q96PS8 301 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 DIRC2Q96SL1 478 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 INTS14Q96SY0 518 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 SEMA5BQ9P283 1151 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 PHIPQ8WWQ0 1821 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF106Q9H2Y7 1883 aaKnown RBP7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 CCDC163A0A0D9SF12 145 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 A0A0U1RQV5 110 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 MYBPHLA2RUH7 354 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 K7EP13 123 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 CXCL1P09341 107 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 PNLIPRP1P54315 467 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 RPS11P62280 158 aaKnown RBP eCLIP7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF85Q03923 595 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 ENPP2Q13822 863 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 TMEM229BQ8NBD8 167 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 OR9K2Q8NGE7 335 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 SLC2A12Q8TD20 617 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 FRZBQ92765 325 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 MOAP1Q96BY2 351 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 CMBLQ96DG6 245 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 ARSGQ96EG1 525 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 RSPO3Q9BXY4 272 aaPredicted RBP7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 SERINC1Q9NRX5 453 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 TMEM30AQ9NV96 361 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 ANKRD10Q9NXR5 420 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 P2RX2Q9UBL9 471 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF223Q9UK11 482 aaPredicted RBP7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 CCNL1Q9UK58 526 aaPredicted RBP7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 SH2B3Q9UQQ2 575 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 LTBP1Q14766 1721 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 KIAA1671Q9BY89 1806 aa7.75□□□□□ -1.17
SRGAP1-202ENST00000537556 C13orf42A0A1B0GVH6 325 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 DRGXA6NNA5 263 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 PLRG1O43660 514 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 DNAJB6O75190 326 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF432O94892 652 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 CST4P01036 141 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 APODP05090 189 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 CTSHP09668 335 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 PET100P0DJ07 73 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 ZBTB25P24278 435 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 BRS3P32247 399 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 BMI1P35226 326 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 TAGLN2P37802 199 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 DIO1P49895 249 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 NPY4RP50391 375 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 UCP2P55851 309 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 KLF3P57682 345 aaPredicted RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 NKAIN1Q4KMZ8 207 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 MIDNQ504T8 468 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 ANKRD16Q6P6B7 361 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 P4HA3Q7Z4N8 544 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 SLC25A42Q86VD7 318 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 SYS1Q8N2H4 156 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 OR52L1Q8NGH7 329 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 OR9A1PQ8NGU1 263 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 ABHD5Q8WTS1 349 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 SKA2Q8WVK7 121 aaPredicted RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 AUTS2Q8WXX7 1259 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 RAB8BQ92930 207 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 DVL3Q92997 716 aaPredicted RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 CNN2Q99439 309 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 GFI1Q99684 422 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 FAAP24Q9BTP7 215 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 RNF126Q9BV68 326 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 BOCQ9BWV1 1114 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 KATNBL1Q9H079 304 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 SLC25A18Q9H1K4 315 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 DPEP2Q9H4A9 486 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 STEAP1Q9UHE8 339 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 CD84Q9UIB8 345 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF346Q9UL40 294 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 RPH3ALQ9UNE2 315 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 PLXNA1Q9UIW2 1896 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 ZC3H12DA2A288 527 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF354AO60765 605 aaPredicted RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 ETHE1O95571 254 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 AMBPP02760 352 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 MRPL3P09001 348 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 CSNK1DP48730 415 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 RPS26P62854 115 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 MAP2K5Q13163 448 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 DUSP5Q16690 384 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 FAHD2BQ6P2I3 314 aaPredicted RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 PRSS54Q6PEW0 395 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF705AQ6ZN79 300 aaPredicted RBP7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 SZRD1Q7Z422 152 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 SUMF2Q8NBJ7 301 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 OR5K2Q8NHB8 316 aa7.74□□□□□ -1.17
SRGAP1-202ENST00000537556 CLP1Q92989 425 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms