RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 EPHA1P21709 976 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 LAP3P28838 519 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 GCH1P30793 250 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 KDELR2P33947 212 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 RBMXP38159 391 aaKnown RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 GDI2P50395 445 aaKnown RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 CTXN1P60606 82 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 CD47Q08722 323 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 SF3A3Q12874 501 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP28-203ENST00000537490 KLF10Q13118 480 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 TOP3AQ13472 1001 aaPredicted RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 CYBRD1Q53TN4 286 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 ALG10Q5BKT4 473 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 FAM27BQ5VT28 67 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 ERICH5Q6P6B1 374 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 RFPL4BQ6ZWI9 263 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 ZNF771Q7L3S4 317 aaPredicted RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 HDDC2Q7Z4H3 204 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 IGFN1Q86VF2 1251 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 KLF14Q8TD94 323 aaPredicted RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 ZNF418Q8TF45 676 aaPredicted RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 ZFAND2BQ8WV99 257 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 IPCEF1Q8WWN9 437 aaPredicted RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 CCL17Q92583 94 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 RAB39BQ96DA2 213 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 SH3GL1Q99961 368 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 SIKE1Q9BRV8 207 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 OR2H1Q9GZK4 316 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 OR2J1Q9GZK6 312 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 POLR2J2Q9GZM3 115 aaKnown RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 POLR2J3Q9H1A7 115 aaKnown RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 WNT5BQ9H1J7 359 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 SAP30LQ9HAJ7 183 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 SMURF2Q9HAU4 748 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 GMPR2Q9P2T1 348 aaKnown RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 STX18Q9P2W9 335 aaKnown RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 EIF3KQ9UBQ5 218 aaKnown RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 KLHL21Q9UJP4 597 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 PCDHB10Q9UN67 800 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 A4GNTQ9UNA3 340 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 HIF3AQ9Y2N7 669 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 TRAV27A0A087WT01 109 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 LOC100653049A0A140TA62 436 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 NPIPB13A6NJU9 1138 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 CLDN25C9JDP6 229 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 NPIPB4C9JG80 1138 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 KRT34O76011 436 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 UBOX5O94941 541 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 NPPAP01160 153 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 IFNA14P01570 189 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 MT-ND5P03915 603 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 SCG5P05408 212 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 CST2P09228 141 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 ADRA2CP18825 462 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 YAP1P46937 504 aaKnown RBP7.17□□□□□ -1.26
USP28-203ENST00000537490 ARFIP2P53365 341 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 HILS1P60008 231 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 RPL27P61353 136 aaKnown RBP7.17□□□□□ -1.26
USP28-203ENST00000537490 PPP1CBP62140 327 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 SELENOWP63302 87 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 ST3GAL3Q11203 375 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 FHL1Q13642 323 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 ENDOGQ14249 297 aaKnown RBP7.17□□□□□ -1.26
USP28-203ENST00000537490 TAF11Q15544 211 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 HFEQ30201 348 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 LRRC23Q53EV4 343 aaPredicted RBP7.17□□□□□ -1.26
USP28-203ENST00000537490 COQ5Q5HYK3 327 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 FAM209AQ5JX71 171 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 MBNL2Q5VZF2 373 aaKnown RBP7.17□□□□□ -1.26
USP28-203ENST00000537490 ZNF774Q6NX45 483 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 FOXL2NBQ6ZUU3 175 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 HDXQ7Z353 690 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 C1QL2Q7Z5L3 287 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 PEG10Q86TG7 708 aaKnown RBP7.17□□□□□ -1.26
USP28-203ENST00000537490 MICU2Q8IYU8 434 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 ZNF454Q8N9F8 522 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 OR51A7Q8NH64 312 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 ABHD4Q8TB40 342 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 RAB1CQ92928 201 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 BPIFA2Q96DR5 249 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 ELMOD3Q96FG2 381 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 TPD52L3Q96J77 140 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 PRRC1Q96M27 445 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 RBP7Q96R05 134 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 ALG12Q9BV10 488 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 PLA2G12AQ9BZM1 189 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 MSL2Q9HCI7 577 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 SAR1AQ9NR31 198 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 DCAF16Q9NXF7 216 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 RHCGQ9UBD6 479 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 OPN4Q9UHM6 478 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 TIMM10BQ9Y5J6 103 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 SNX13Q9Y5W8 968 aa7.17□□□□□ -1.26
USP28-203ENST00000537490 A0A0G2JMP0 313 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 A0A0X1KG70 313 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 A0A1W2PPL8 197 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 TMEM89A2RUT3 159 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 FAM220BPB1ANY3 271 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 H7C1C5 153 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 J3KTA2 159 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms