RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 FAM153CQ494X1 144 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 PABPC1L2AQ5JQF8 200 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 GRTP1Q5TC63 336 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 ATG16L1Q676U5 607 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 TMEM219Q86XT9 240 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 RBM15BQ8NDT2 890 aaKnown RBP7.6□□□□□ -1.19
CPSF7-217ENST00000537162 OR10AD1Q8NGE0 317 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 OR51G2Q8NGK0 314 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 ZNF764Q96H86 408 aaPredicted RBP7.6□□□□□ -1.19
CPSF7-217ENST00000537162 LYZL4Q96KX0 146 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 TSSK3Q96PN8 268 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 LRMDAQ9H2I8 198 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 ERVK-18Q9QC07 812 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 BAIAP2L1Q9UHR4 511 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 SCOCQ9UIL1 159 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 GUCA1BQ9UMX6 200 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 KPTNQ9Y664 436 aa7.6□□□□□ -1.19
CPSF7-217ENST00000537162 TCRBV9S1A1TA0A576 114 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 CCDC189A1A4V9 331 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 A8MT66 165 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 FAAHO00519 579 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 FBP2O00757 339 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 MBD3O95983 291 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 SBK3P0C264 359 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 GKN3PP0CG01 181 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 ANXA11P50995 505 aaKnown RBP7.59□□□□□ -1.19
CPSF7-217ENST00000537162 ARL4CP56559 192 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 UNC50Q53HI1 259 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 CAVIN1Q6NZI2 390 aaKnown RBP7.59□□□□□ -1.19
CPSF7-217ENST00000537162 LRFN4Q6PJG9 635 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 GPRIN3Q6ZVF9 776 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 SLC16A14Q7RTX9 510 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 CTAGE3PQ8IX95 158 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 CADM2Q8N3J6 435 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 HIPK4Q8NE63 616 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 OR56A1Q8NGH5 318 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 TUBGCP3Q96CW5 907 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 DUX3Q96PT4 197 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 FAM234AQ9H0X4 552 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-217ENST00000537162 ZNF256Q9Y2P7 627 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-217ENST00000537162 WDR45Q9Y484 360 aa7.59□□□□□ -1.19
CPSF7-217ENST00000537162 HSPG2P98160 4391 aa7.59□□□□□ -1.2
CPSF7-217ENST00000537162 CFAP73A6NFT4 308 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 NKX6-3A6NJ46 265 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 E7ESA3 106 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 IFNL4K9M1U5 179 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 SURF4O15260 269 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 ADAM20O43506 726 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 AKAP8O43823 692 aaKnown RBP7.58□□□□□ -1.2
CPSF7-217ENST00000537162 AHSA1O95433 338 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 C6orf47O95873 294 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 PTHP01270 115 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 KRT16P08779 473 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 SDC1P18827 310 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 MATN1P21941 496 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 AHCYP23526 432 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 GRPRP30550 384 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 RAB13P51153 203 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 PLP2Q04941 152 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 C2orf54Q08AI8 447 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 CNN3Q15417 329 aaKnown RBP7.58□□□□□ -1.2
CPSF7-217ENST00000537162 SPDYE7PQ495Y7 208 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 PLA1AQ53H76 456 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 MROH9Q5TGP6 573 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 SFRP4Q6FHJ7 346 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-217ENST00000537162 HCP5Q6MZN7 132 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 KLC3Q6P597 504 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 ARL9Q6T311 187 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 LIAT1Q6ZQX7 453 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 C16orf62Q7Z3J2 963 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 UEVLDQ8IX04 471 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 OR5AS1Q8N127 324 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 LRRC18Q8N456 261 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 DTX3Q8N9I9 347 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 ATG16L2Q8NAA4 619 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 OR7A2PQ8NGA2 310 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 AKR7LQ8NHP1 331 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 PSMA8Q8TAA3 256 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 FAM76AQ8TAV0 307 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 CDKL2Q92772 493 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 TAAR8Q969N4 342 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 C1QTNF3Q9BXJ4 246 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 PRSS22Q9GZN4 317 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 RMND5AQ9H871 391 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 MAN2C1Q9NTJ4 1040 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 RLIMQ9NVW2 624 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 MKS1Q9NXB0 559 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 MRPL15Q9P015 296 aaKnown RBP7.58□□□□□ -1.2
CPSF7-217ENST00000537162 EIF3KQ9UBQ5 218 aaKnown RBP7.58□□□□□ -1.2
CPSF7-217ENST00000537162 CCL27Q9Y4X3 112 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 VPS13DQ5THJ4 4388 aa7.58□□□□□ -1.2
CPSF7-217ENST00000537162 LOC102725191A0A1B0GVB3 256 aa7.57□□□□□ -1.2
CPSF7-217ENST00000537162 ELOVL7A1L3X0 281 aa7.57□□□□□ -1.2
CPSF7-217ENST00000537162 DVL1O14640 695 aa7.57□□□□□ -1.2
CPSF7-217ENST00000537162 FZD7O75084 574 aa7.57□□□□□ -1.2
CPSF7-217ENST00000537162 SMIM24O75264 130 aa7.57□□□□□ -1.2
CPSF7-217ENST00000537162 GLRA3O75311 464 aa7.57□□□□□ -1.2
CPSF7-217ENST00000537162 LY86O95711 162 aa7.57□□□□□ -1.2
CPSF7-217ENST00000537162 SNRNP70P08621 437 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms