RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SLC6A6P31641 620 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 SERPINF1P36955 418 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 KRTAP1-1Q07627 177 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 RFX4Q33E94 735 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 FAHD1Q6P587 224 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 VHLLQ6RSH7 139 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 HDDC2Q7Z4H3 204 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 IGFN1Q86VF2 1251 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 SKA3Q8IX90 412 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 CLDN22Q8N7P3 220 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 LRRC75AQ8NAA5 344 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 OR52L1Q8NGH7 329 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 FGFBP3Q8TAT2 258 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 CIB1Q99828 191 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 TMEM38BQ9NVV0 291 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 CDH10Q9Y6N8 788 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 PMF1-BGLAPU3KQ54 211 aa15.46■□□□□ 0.07
TNFRSF1A-209ENST00000536717 NPIPB13A6NJU9 1138 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 NPIPB4C9JG80 1138 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 TRMUO75648 421 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 CD14P08571 375 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 OR4A8P0C604 315 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 PATE4P0C8F1 98 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 BMP4P12644 408 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 ZNF26P17031 533 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 GIPRP48546 466 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 FXYD6P3P58550 94 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 RAB1AP62820 205 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 MYBPC1Q00872 1141 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 ARMC4Q5T2S8 1044 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 DPY19L2P2Q6ZN68 376 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 SLC22A24Q8N4F4 322 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 NOXO1Q8NFA2 376 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 IL17RDQ8NFM7 739 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 OR10H5Q8NGA6 315 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 NANOS1Q8WY41 292 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 MCHR2Q969V1 340 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 EME1Q96AY2 570 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 SAMD8Q96LT4 415 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 GPX7Q96SL4 187 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 RBM4BQ9BQ04 359 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 C9orf16Q9BUW7 83 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 RBM4Q9BWF3 364 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 TXNIPQ9H3M7 391 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 EGLN3Q9H6Z9 239 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 ZNF442Q9H7R0 627 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 PAPOLBQ9NRJ5 636 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 IL20Q9NYY1 176 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 STX18Q9P2W9 335 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 IL20RAQ9UHF4 553 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 JMJD1CQ15652 2540 aa15.45■□□□□ 0.06
TNFRSF1A-209ENST00000536717 IGHV4-30-2A0A087WSY4 118 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 CENPBD1B2RD01 187 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 H3BN98 237 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 SOX14O95416 240 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 ACADSP16219 412 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 THBS4P35443 961 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 PTDSS1P48651 473 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 DAPP51397 102 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 CLRN1P58418 232 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 TOP3AQ13472 1001 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 EFNB3Q15768 340 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 THSD4Q6ZMP0 1018 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 ZNF525Q8N782 197 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 SYT14Q8NB59 555 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 SMURF2Q9HAU4 748 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 KRT84Q9NSB2 600 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 TBC1D23Q9NUY8 699 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 GRHPRQ9UBQ7 328 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 RRP15Q9Y3B9 282 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 MALRD1Q5VYJ5 2156 aa15.44■□□□□ 0.06
TNFRSF1A-209ENST00000536717 B9A039 149 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 LY6HO94772 140 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 UBL3O95164 117 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 IGHMP01871 453 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 OR8G3PP0DMU2 310 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 ZNF35P13682 527 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 OSMP13725 252 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 RPS6KA3P51812 740 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 ZNF133P52736 654 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 RPL27P61353 136 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 SNRPD2P62316 118 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 ERVK-25P63136 954 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 PPP2R2BQ00005 443 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 SLC36A3Q495N2 470 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 FAM205BPQ63HN1 556 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 KDM4DQ6B0I6 523 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 ZNF584Q8IVC4 421 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 TEX47Q8TBZ9 253 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 HDAC2Q92769 488 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 SORCS2Q96PQ0 1159 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 SH3GL3Q99963 347 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 IFT27Q9BW83 186 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 PLK3Q9H4B4 646 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 NRIP3Q9NQ35 241 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 ENOPH1Q9UHY7 261 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 A0A096LNT2 108 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 RAB36O95755 333 aa15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 APEHP13798 732 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-209ENST00000536717 IGFBP5P24593 272 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms